Luteimonas chenhongjianii: CNR27_06160
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Entry
CNR27_06160 CDS
T05077
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lum
Luteimonas chenhongjianii
Pathway
lum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNR27_06160 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lum03021
]
CNR27_06160 (rpoB)
03400 DNA repair and recombination proteins [BR:
lum03400
]
CNR27_06160 (rpoB)
Enzymes [BR:
lum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNR27_06160 (rpoB)
Transcription machinery [BR:
lum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CNR27_06160 (rpoB)
DNA repair and recombination proteins [BR:
lum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CNR27_06160 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ATD67077
UniProt:
A0A290XD77
LinkDB
All DBs
Position
1345883..1350058
Genome browser
AA seq
1391 aa
AA seq
DB search
MTTSQLQPTYSFTEKKRIRKNFGKRRQILEVPFLLAIQVDSYREFLQTDRDPAKREDRGL
HAALKSVFPIVSYNGYAALEYVGYKLGEPGFDERECRNRGLSYGAPLRVTVRLVIYDRES
SSKAIKYVKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGK
LLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSVLLRALGYNNEEMLNEFFDINT
YHILPEGEGVQLELVSERLRGETLNFDLLDGEKVIVEAGKRITARHVKQLEASGITALAV
PDDYMVGQILSHDVIDPSTGELVATANDEISLETLEALRKAGIETIGTIWVNDLDRGPYL
SNTLRIDSTKTQLDALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDVSSVGRMKFNR
RLGRKETEGASVLYDAKYFAERKDEDSVRLRNEFGQSSDILDVIRVLTEIRNGRGVVDDI
DHLGNRRVRSVGEMAENVFRVGLVRVERAVRERLTMAEADGLTPQELINAKPVAAAVKEF
FGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPE
GPNIGLINSLATFARTNRYGFLETPYRKVVDSRVTDEIEYLSAIEENDYVIAQANAVQDE
NGTMTQQFVDCRFQGESLLKPPAEIHYMDVSPMQTVSVAAALVPFLEHDDANRALMGANM
QRQAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGVIEQIDAGRVVVKVHEEEISGEH
DAGVDIYNLIKYTRSNQNTCINQRPLVNVGDVVARGDVLADGPSTDIGELALGQNMLVAF
MPWNGYNFEDSILLSERVVKEDRYTTIHIEELTAVARDTKLGPEEISADIPNVSENALNR
LDESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGM
DGTVIDVQVFTRDGIEKDKRAKQIEESEIKRVKKDFDDQFRILESAIYARLRSQIQGKVA
NGGPGLKKGDTVSSLVLDSLKKSDWFQIRMKDEDASEAIERAQKQIDAHQKEFEKRFADK
RGKITQGDDLAPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVVSTIVPVQDMPYMANGN
TVDIVLNPLGVPSRMNIGQILEVHLGLAAKGLGEKIQRMLDAQAKVAELRTFLDQIYNHD
RASFAERVDLTQFSDEELLRLAGNLTDGVPMATPVFDGAAESEIKAMLELADLPTSGQTR
LFDGRTGEAFEREVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFG
EMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIR
SLAINMELEEH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtcccagctccagccgacctactcgttcaccgagaagaagcgcatccgcaag
aacttcggaaagcgccgccagattctcgaagtgcctttcctcctcgccatccaggtcgat
tcgtaccgggaattcctgcagaccgaccgtgaccccgccaagcgcgaggatcgtggcctg
cacgctgcgctgaagtcggtgttcccgatcgtcagctacaacggctacgcagccctggag
tacgtcggctacaagctcggcgagcccggcttcgacgagcgtgaatgccgcaaccgtggc
ctgagctacggcgccccgctgcgcgtgaccgtgcgcctggtgatctacgaccgcgagtcg
tcgagcaaggcgatcaagtacgtgaaggagcaggaggtctacatgggcgagattccgctc
atgaccgagaacggcaccttcatcatcaacggcaccgagcgcgtcatcgtctcgcagctg
caccgctcgcccggcgtgttcttcgaccacgaccgcggcaagacccacagctcgggcaag
ctgctgtattcggcccgcatcattccctaccgcggctcgtggctggacttcgagttcgac
ccgaaggacgcgttgttcacccgtatcgaccgccgccgcaagctgccggtcagcgtgctg
ctgcgcgcgctcggctacaacaacgaagaaatgctcaacgagttcttcgacatcaacacc
taccacatcctccccgagggtgagggcgtgcagctggagctggtgtcggagcgtctgcgc
ggcgaaacgctgaacttcgacctgctcgacggcgagaaggtcatcgtcgaggcgggcaag
cgcatcaccgcgcgccacgtcaagcagctcgaggcttcgggcatcaccgcgcttgcggtg
ccggacgactacatggtcggccagatcctctcgcatgacgtgatcgatccgtcgaccggc
gagctggtcgcgaccgccaatgacgagatctcgctcgagacgctcgaggcgctgcgcaag
gccggcatcgagaccatcggcacgatctgggtcaacgacctcgaccgcggcccgtacctg
tcgaacaccctgcgcatcgactcgaccaagacgcagctcgatgcgctggtggagatctac
cgcatgatgcgtcccggcgagccgccgaccaaggatgccgcgcagaacctgttccacaac
ctgttcttcaccttcgagcgctacgacgtctccagcgtcggccggatgaagttcaaccgt
cgcctgggtcgcaaggagaccgaaggcgcgtccgtgctgtacgacgcgaagtacttcgcc
gagcgcaaggacgaggattcggtgcggctgcgcaacgaattcggccagagttccgacatc
ctcgatgtgatccgcgtgctgaccgagatccgcaacggtcgcggcgtggtcgatgacatc
gatcacctcggcaaccgccgcgtgcgcagcgtcggcgaaatggccgagaacgtgttccgc
gtgggcctggtccgcgtcgagcgcgccgtgcgtgagcgcctgacgatggccgaggccgat
ggcctgaccccgcaggagctgatcaacgccaagccggtcgcggccgcggtcaaggaattc
ttcggctcctcgcagctgtcgcagttcatggaccagaacaacccgctgtcggaagtcacg
cacaagcgtcgcgtctcggccctcggcccgggcggcctgacccgcgagcgcgccggcttc
gaagtgcgcgacgtgcatcccacgcactacggccgcgtctgcacgatcgagacgccggaa
ggcccgaacatcggcctgatcaattcgctcgcgacgttcgcgcgtaccaaccgttacggc
ttcctcgagaccccgtaccgcaaggtcgtcgacagccgcgtcaccgacgagatcgaatac
ctctcggcgatcgaagagaacgactacgtcatcgcgcaggccaacgccgtgcaggacgag
aacggcacgatgacgcagcagttcgtcgactgccgcttccagggcgaatccctgctcaag
ccgccggcggagatccattacatggacgtctcgccgatgcagaccgtgtcggtcgcggcc
gcgctggttccgttcctcgagcacgatgacgcgaaccgcgcactgatgggcgccaacatg
cagcgtcaggcagtgccgacgctgcgtgcgcagaagccgctggtcggtaccggcatcgag
cgcgccgtggcgcgtgactccggtgtgaccgtgaatgcccgccgtggcggcgtgatcgag
cagatcgatgccggccgcgtcgtggtcaaggtgcatgaagaggagatttccggcgagcac
gatgccggcgtcgacatctacaacctgatcaagtacacgcgctccaaccagaacacctgc
atcaaccagcgtccgctggtgaacgtgggtgacgtggtcgcgcgcggcgacgtgctggcc
gacggcccctcgaccgacatcggcgagctggcgctcggccagaacatgctcgtcgcgttc
atgccgtggaacggctacaacttcgaagactcgatcctgctgtcggagcgcgtcgtcaag
gaagaccgttacacgacgatccacatcgaggagctgaccgcggtcgcccgcgacacgaag
ctcgggccggaggaaatctccgccgacattcccaacgtgtcggagaacgcgctcaaccgt
ctcgacgagtccggcgtggtgtacatcggcgccgaagtgcgcgccggcgacatcctggtc
ggcaaggtcacgcccaagggcgaaagccagctgaccccggaagagaagctgctgcgcgcg
atcttcggcgagaaggcgtccgacgtgaaggacagctcgctgcgcgtgccgccgggcatg
gacggcacggtcatcgacgtgcaggtcttcacccgcgacggcatcgagaaggacaagcgc
gccaagcagatcgaagagtccgagatcaagcgcgtcaagaaggacttcgacgaccagttc
cgcatcctcgagtcggcgatctacgcgcgcctgcgttcgcagatccagggcaaggtcgcc
aatggcggtcccggcctgaagaagggcgacacggtcagctcgctggtgctcgacagcctg
aagaagtccgactggttccagatccgcatgaaggacgaggacgcgtcggaggcgatcgag
cgtgcgcagaagcagatcgacgcgcaccagaaggagttcgagaagcgcttcgccgacaag
cgcggcaagatcacccagggcgacgacctcgcgccgggcgtgctgaagatggtcaaggtc
tacctggccgtgaagcgccgcatccagccgggcgacaagatggccggccgtcacggcaac
aagggtgtggtctcgaccatcgtgcccgtgcaggacatgccgtacatggccaacggcaac
accgttgacatcgtgctcaacccgctgggcgtgccctcgcgtatgaacatcggccagatc
ctcgaagtccacctgggcctcgcggccaaggggctgggcgagaagatccagcggatgctc
gatgcgcaggccaaggttgcagagctgcggacgttcctcgaccagatctacaaccacgac
agggcctcgttcgcggagcgcgtcgacctcacccagttcagcgacgaggaactgctgagg
ctcgccggcaacctgaccgacggtgtgccgatggcgactccggtgttcgacggcgcggcc
gaatcggagatcaaggcgatgctggaactggccgatctgcccaccagcggccagacccgg
ctgttcgatggccgtaccggcgaggcgttcgagcgtgaagtgaccgtgggttacatgcac
atgctcaagctcaaccacctggtcgacgacaagatgcacgcgcgttcgaccggtccgtac
tcgctcgtcacccagcagccgctgggcggcaaggcgcagttcggtggtcagcgtttcggc
gagatggaagtctgggcgctggaagcctacggcgcggcctacaccctgcaggaaatgctg
acggtgaagtccgacgacgtgcagggccgcaaccagatgtacaagaacatcgtcgacggc
gagcacgagatggtcgcgggcatgcccgaatcgttcaacgtgctggtgaaggaaatccgt
tcgctcgcgatcaacatggagctggaggagcactga
DBGET
integrated database retrieval system
