Luteimonas chenhongjianii: CNR27_06595
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Entry
CNR27_06595 CDS
T05077
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lum
Luteimonas chenhongjianii
Pathway
lum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNR27_06595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lum03019
]
CNR27_06595
Enzymes [BR:
lum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNR27_06595
Messenger RNA biogenesis [BR:
lum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNR27_06595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATD67155
UniProt:
A0A290XDC7
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All DBs
Position
1442724..1444106
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AA seq
460 aa
AA seq
DB search
MTFEDLGLSPALLRALAETSYTTPTPIQEQAIPLILGGNDVLGGAQTGTGKTAAFGLPLL
QRLAKETPPKGPRKPRALILVPTRELAVQVADNLKTYGRHLRMNVTTIFGGAGMQPQIDN
LRRGVDVLIACPGRLIDHMDSGHAKLDAVEVLVLDEADRMLDMGFLPQMKRIMSRVPKTR
QTLLFSATFEPRIKAMALEFMRDPKQVTVAANSTIAETIAHRAHPVDNARKRDLLVELLS
KRHMDQVLVFGKTKHGCNRLAEQLAESGLPSVAIHGNKSQAQRQKALDAFKSGRARILVA
TDVAARGLDIPNLPLVINHDLPMVAEDYVHRIGRTGRNGATGEALSLVSPEEGGLLRQIQ
RMLNAEITMETVEGFAPSQPIRLDTPIPKNGGGGQRRQPGGGRPGARMGEQKPGGERAPR
KPGNRGHGKPADRSVHAHAGPKQHRPGAGRAQSERRDSRA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgaagatctcgggctgtcgcccgcgctgctgcgcgcgctcgccgaaaccagc
tacaccactcccacgccgatccaggaacaggccatcccgctgatcctcggtggcaacgac
gtgcttggcggcgcccagaccggcaccggcaagaccgctgcattcggcctgccgctgctg
cagcgcctggccaaggaaaccccgcccaagggtccgcgcaagccgcgcgcgctgatcctg
gtgccgacccgcgaacttgcagtgcaggttgccgataacctcaagacctacggtcgtcac
ctgcgcatgaacgtcaccacgatcttcggtggcgccggcatgcagccgcagatcgacaac
ctgcgccgcggcgtcgacgtgctgatcgcctgcccgggccggctgatcgaccacatggac
agcggccacgccaagctcgacgcagtcgaggtgctggtgctcgacgaagccgaccggatg
ctcgacatgggcttcctgccgcagatgaagcgcatcatgagccgtgtgcccaagacgcgt
cagacactgctgttctcggccacgttcgagccgcggatcaaggcgatggcgctggagttc
atgcgcgatcccaagcaggtcacggtggcggccaacagcaccatcgccgagaccatcgcc
caccgcgcgcacccggtcgacaacgcccgcaagcgcgacctgctggtcgagctgctctcc
aagcgccacatggatcaggtgctcgtgttcggcaagaccaagcacggctgcaaccgcctg
gccgagcagctggccgagtccggcctgccatcggttgcgatccacggcaacaagagccag
gcgcagcgccagaaggcgctggacgcgttcaagtccggtcgcgcccgcatcctggtggcg
accgacgtcgccgcgcgcggtctcgacatcccgaaccttccgctggtgatcaaccacgac
ctgccgatggtcgccgaggattatgtgcaccgcatcggccgtaccggtcgcaacggtgcg
acgggcgaggcgctgtcgctggtatcgccggaagaaggcggcctgctgcggcagatccag
cgcatgctcaatgccgagatcacgatggagacggtggaaggcttcgcgccgagccagccg
atccggctggatacgccgatcccgaagaacggcggaggcggtcagcgtcgccagccgggc
ggcggccgtccgggtgcgcgcatgggcgagcagaagccgggtggtgagcgcgcaccgcgc
aagccgggcaaccggggtcatggcaagccggcggatcgcagcgtgcatgcgcatgccggt
cccaagcagcaccgtccgggcgccggccgcgcgcagtccgagcgtcgcgacagccgggcc
tga
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