Luteimonas chenhongjianii: CNR27_09715
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Entry
CNR27_09715 CDS
T05077
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lum
Luteimonas chenhongjianii
Pathway
lum02020
Two-component system
lum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CNR27_09715 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CNR27_09715 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lum03021
]
CNR27_09715 (rpoN)
Transcription machinery [BR:
lum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNR27_09715 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_Crp_2
HTH_23
HTH_21
MarR_2
LacI
HTH_26
Sigma70_r4
Phage_CII
HTH_AraC
TrmO_C
Motif
Other DBs
NCBI-ProteinID:
ATD67675
UniProt:
A0A290XEV6
LinkDB
All DBs
Position
complement(2125908..2127314)
Genome browser
AA seq
468 aa
AA seq
DB search
MKASATTSMQLGQQLQMTPQLLQSIRLLQLDGLQLELEIRRALEQNPLLELDEESTASPV
PEPADGMSDVAAFDELPESSLWDVRGASWNGDDSDGLQRIAADDSTDPHLRILQRLSMAL
GEGDLAIAAFWLEHCDDAGYLAAPHAGLLDAGATRFGRTPAEVEGVRQRLLSGDPAGVAA
RNLRECLVAQLDALPGRVAGRGLARRILDEALELLGAHDIAGVARQLGRDEADIQEAVRL
ILSLDPRPAEAGAPMESTAVVPDVVVWHADAGWRVALNPAAAPRVSINAGYERALADGEG
SAPMREMLQEARWFTRGLAMRYDTLLRTARVIVERQAAFLERGEESMAPLTLKDVADAIG
MHESTVSRITNGKFLQTPRGTIEMKRFFAVRLDGASVSGAAVRAMVRRLIEAEPAQNPLA
DEAIAALLARQGVHIARRTVAKYREQLDIAPARTRRRGARPTLLARAG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagtgctaccacctcgatgcagctgggccaacagctgcagatgacgccccag
ctgctgcaatcgatccggctgctccagctcgacggcctgcagctcgaactggagatccgt
cgggccctggagcagaacccgctgctggaactcgacgaggaatccactgcaagtccggtg
ccggaacctgcagacggcatgtccgacgtcgccgcattcgacgaactgcccgaatcctcg
ctgtgggacgtgcgcggggcgagctggaacggcgacgactcggacggcctgcagcgcatc
gcggccgacgactccaccgatccgcatctgcgcatcctgcagcgcctgtcgatggcgctc
ggcgagggcgacctcgcgatcgccgcattctggctcgagcattgcgacgacgccggctat
ctcgccgcgccgcacgccggactgctcgacgcaggcgccacgcgtttcgggcgcacgcct
gccgaagtcgagggcgtgcgccagcgtttgttgtccggcgatcccgccggcgtggccgcg
cggaatctgcgcgagtgcctggtcgcccagctcgacgccctgcctggccgcgtcgccggc
cgtgggctcgcgcgccggatcctcgacgaggcgctcgagctgctgggcgcgcacgacatc
gccggcgtcgcccgtcagctgggacgcgacgaagcggatatccaggaagccgtacgcctg
atcctgtcgctggacccgcgccccgccgaagccggtgcgccgatggaaagcacggcggtg
gtgccggatgtggtggtctggcacgccgatgccggctggcgggtcgcgctcaatccagcc
gccgcgccgcgggtgtcgatcaatgccggctatgagcgtgcactggccgatggcgaaggc
agcgcgccgatgcgcgagatgctgcaggaggcgcgctggttcacgcgcggcctggcgatg
cgctacgacaccctgctgcgcaccgccagggtcatcgtcgagcggcaggccgcgttcctg
gagcgcggtgaggaatcgatggcgccgctcacgctcaaggacgtcgccgatgcgatcggc
atgcacgagtccacggtttcgcgcatcaccaatggcaagttcctgcagacaccgcgcggg
acgatcgagatgaagcgcttcttcgccgtgcgcctcgatggcgccagcgtctcgggcgcc
gcggtcagggcgatggtgcgccggctgatcgaggcggaaccggcgcagaatccgctggcc
gacgaggccatcgccgcgctgctggccaggcagggcgtgcacatcgcacgccgcaccgtg
gccaagtaccgcgaacagctcgacatcgctccggcgcgcacgcgccgccgcggcgcccgc
cccaccctgctcgcccgcgcgggctga
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