Luteolibacter luteus: HHL09_04075
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Entry
HHL09_04075 CDS
T06562
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
luo
Luteolibacter luteus
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
luo03016
]
HHL09_04075
Enzymes [BR:
luo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
HHL09_04075
Transfer RNA biogenesis [BR:
luo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
HHL09_04075
Prokaryotic type
tRNA splicing ligases
HHL09_04075
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QJE94989
UniProt:
A0A858REY8
LinkDB
All DBs
Position
complement(1025301..1026785)
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AA seq
494 aa
AA seq
DB search
MNSIHKTDEAIGFLPLPENKGKPITVIGTDAIRDNFDETCIQQAINSRMAPGVTDVILNP
DAHAGYGAPVGCVMVSPTHIYPGPVGVDIKCSMSLLQLDIPEDAIRDKATRRALINAIVE
RTPTGAGRGQRSAKKARLVDRELGASAVTQGASREVCEALGIPFEWAQRCEDSTHVGHDG
TYDALRSRLDFILDAGRIRNFAEKMTQLGSYGGGNHFGECEITQVTDRPWARETAETFGL
RDGHVSFLSHCGSRGFGNLLAQGQFRDLENKFRAWSTPFPAGDKQLVYAPLGTPEADAYL
DDMALGANFATVNHLLINALVLEAFQEVLPGAKGRLVYFISHNIAREEIVDGQKSWVHRK
GATRAIPGGHFSLKDTPFEKTGHPILLPGNPRDGSVVMVARAGAERTAWSVNHGAGRQMG
RKHAARTLDQKTVNAEFDVSDIMTNCRNYPIDEAPEAYKNFPEVLRSVESARLAETVAKL
QARFVIKDEAAADD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaactccatccacaagaccgacgaagccatcggcttcctccctcttcccgaaaacaag
ggcaagccgatcacggtgatcggaaccgatgcgatccgggacaacttcgacgagacctgt
atccagcaggcgatcaattcgcgaatggcgccgggggtgacggatgtgatcctgaatccg
gatgctcatgcgggctatggtgcgccggtaggatgcgtgatggtttcgcctacgcacatc
tatccggggccggtgggggtggacatcaagtgctccatgagcctgcttcagctcgatatt
cccgaggatgcgattcgtgacaaggcgacccggcgtgcgctgatcaatgcgatcgtcgag
cgaaccccgactggtgctggccgcgggcagcgctccgcgaagaaagcgcgtttggttgac
cgggaactcggcgcaagtgccgtgacgcagggggccagccgtgaggtttgcgaggctctc
gggattccgttcgagtgggcacagcgatgtgaggactccacgcatgtcggccatgatgga
acctacgatgcccttcgtagccgcttggacttcattctcgatgccgggcgtatccggaat
ttcgcagaaaagatgacccagcttggctcctatggtgggggaaaccatttcggcgagtgt
gagatcacgcaggtgaccgaccgtccgtgggcccgcgaaaccgcggagactttcgggctg
cgggacggccatgtgtccttcctcagccactgtggatcccgtggctttgggaacctgctc
gcgcaaggtcagttcagagacctggagaacaagttccgcgcttggtccacgccttttcca
gccggtgacaagcagctcgtttacgcgccactaggaactccggaggcggatgcctatctg
gatgacatggcgcttggcgcgaacttcgcgaccgtgaaccacctgctcatcaatgccctc
gtgctggaggcctttcaggaagtccttccgggagcgaagggacggctggtctatttcatc
tcgcacaacatcgcgcgggaagaaatcgtcgacggccagaagtcgtgggtgcaccggaag
ggagcaacccgtgcgatccctggcggacatttctcgctgaaggacactccctttgagaag
accggtcacccgattctactgccggggaatccgcgcgatggctcggtggtgatggtggca
cgtgccggtgccgagcgcaccgcgtggtccgtgaatcatggtgcgggccgccagatggga
cgtaagcacgcggcgcggacccttgaccagaagaccgtgaatgccgaattcgatgtctcc
gacatcatgaccaactgccgcaactacccgatcgacgaagcgccggaggcctacaagaac
ttccctgaagtcctgcgtagcgtggaaagcgcccgtctcgccgaaacggtggcgaaactc
caggctcgcttcgtgatcaaagacgaggcggctgccgacgattga
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