Luteolibacter luteus: HHL09_09085
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Entry
HHL09_09085 CDS
T06562
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
luo
Luteolibacter luteus
Pathway
luo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HHL09_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luo03400
]
HHL09_09085
DNA repair and recombination proteins [BR:
luo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HHL09_09085
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HHL09_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
AAA_5
Kinesin
AAA_16
DUF87
Microtub_bd
SWI2_SNF2
TrwB_AAD_bind
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QJE95929
UniProt:
A0A858RHN3
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All DBs
Position
2198915..2201098
Genome browser
AA seq
727 aa
AA seq
DB search
MPFKLSSEYSPQGDQAQAIAKLVKSIRAGNVHQTLLGVTGSGKTFTMANIIEQIGKPTLI
MSHNKTLAAQLFSEFKNFFPNNAVEYFVSYFDYYQPEAYIPRTDTYIEKDSSINDEIERL
RLSTMGSLLTREDTIVIASVSCIYGLGSPDDYEGMMVPVWVGQQIRRDDFLQSLVAILFE
RNDIAFGRGKFRVRGDVVEVHPAYLDETAIRVEFFGDEIDRITSIDTLTGAAIDRMDKHT
FFPAKQFVTPGDKMKKAIVEIRKEAEERVAWFEKEGKLIEAQRLRMRTDYDIEMMQEMGF
CQGIENYSRHLTGRPPGSRPHTLLDFFPDDYLLMMDESHVTIPQVGGMYEGDKSRKTVLV
DHGFRLPSALDNRPLRFDEFMQMTKQRLYVSATPGPFEIVNSRPENKRYIPVKGRGDDRG
FTHIDLKKLRITPSGSAEPVDAFDPGKAGKALVVEQIIRPTGLLDPTLLLRPLKHQIDET
IELCRQRVEKGERVLVTTLTKKTAEDLSEYLQGTGLKVRYIHADIDTVERVEILRQLRAA
AFDILVGINLLREGLDLPEVSLVCILDADKEGFLRNETSLIQTAGRAARHLNGQCVLFCD
EVTDSIQRLIDVTEYRRSRQMAHNEEHGITPQSVKRAVQESLQLYSNQRQAADKLSSSLV
AEDEEAYDKVRVIAELEKEMLEASAKLEFERAAHLRDQINALKDGTPAASAPKQKVSYPK
AGRGRKK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcaaactctccagcgagtattccccacaaggcgatcaggcccaagcgattgcc
aagctcgtaaagtcgatccgggcgggcaatgtccaccaaaccctgctgggcgttaccgga
tcagggaagactttcacgatggcgaacatcatcgagcagatcgggaaaccgacgctgatc
atgagccacaacaagacgctggcggcgcagctcttttccgagttcaagaacttcttcccg
aacaacgcggtcgaatacttcgtctcctacttcgactactaccagccggaggcctacatc
ccgcggacggacacctacatcgagaaggattcctcgatcaacgacgagatcgagcgccta
cgcctctcgacgatgggatcgctgctgacgcgcgaggacacgatcgtgatcgcctcggta
tcctgcatctacggcttgggttcgccggatgactacgagggcatgatggtgccggtgtgg
gtaggccagcagatccggcgcgatgatttcctgcaatcgctcgtcgcgattcttttcgag
cgaaatgacatcgcgttcggacgcggcaagttccgcgtgcgcggggacgtggtcgaggtt
catcctgcctaccttgatgagaccgcaatccgcgtggagttcttcggcgatgagatcgac
cgcatcaccagcatcgacacgctgaccggtgcggcgatcgaccggatggacaagcacacc
ttcttcccggcgaagcagttcgtcacgccgggcgacaagatgaagaaggcgatcgtggag
atccgcaaggaggcggaggagcgcgtggcgtggttcgagaaagagggcaagctgatcgag
gcccagcggctgcgcatgcggaccgactacgacatcgagatgatgcaggagatgggcttc
tgccaggggatcgaaaactattcccgccacctcaccggacgcccgccgggctcacgtccg
cacacgctgctggatttcttcccggatgactacctgctgatgatggacgaaagccacgtc
acaatcccacaggtggggggcatgtatgaaggcgacaaaagccggaagacggtgctggtg
gaccatggtttccgcctgcccagcgcgctggataaccggccgctgcgcttcgacgaattc
atgcagatgacgaagcagcgtctctatgtctccgcgacgccggggcctttcgagatcgtg
aactcccgtccggagaacaagcgctacatcccggtgaagggacggggtgatgaccgtggc
ttcacgcacatcgatctcaagaagctacgcatcacaccgagcggcagcgccgaaccggtg
gatgccttcgatcccgggaaagctggcaaggccctggtcgtggagcagattatccgacct
accgggcttctggacccgacgctgctcttgcgaccactcaaacatcagatcgatgaaacc
atcgagctgtgccgccagcgtgtcgagaaaggcgagcgcgtgctggtcacaacgctcacc
aagaagacggcggaagatctttccgagtatctccaaggcaccggtttgaaggtgcgatac
atccatgcggacatcgacacggtggagcgtgtggagatcctgcggcagctccgcgccgct
gctttcgatattctcgtgggcatcaacctcctccgggaaggactggaccttccggaagtc
tcgctggtctgcatcctggatgcggacaaggaaggcttcctccgcaacgagacgagcttg
atccagacagctgggcgcgccgcccgccacctcaatgggcagtgcgtgctcttctgcgat
gaagtgacggattccatccagcgcctgatcgatgtgacggagtatcgccggagccggcag
atggcgcacaacgaggagcacgggatcacgccacagagcgtgaagcgtgcggtgcaggaa
agcctgcagctctactcgaaccagcgccaagccgccgacaagctcagcagctcgctagtg
gctgaggacgaggaagcctacgacaaggtgcgtgtcatcgcagaactggagaaggagatg
ctcgaggcttccgcgaagctggagttcgagcgcgccgcccacctgcgggatcagatcaat
gcgctgaaggacgggactccggccgcttcggcaccgaagcagaaggtttcctacccgaag
gcgggacgcgggaggaaaaagtag
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