Luteolibacter luteus: HHL09_12780
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Entry
HHL09_12780 CDS
T06562
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
luo
Luteolibacter luteus
Pathway
luo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HHL09_12780 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luo03400
]
HHL09_12780 (uvrA)
DNA repair and recombination proteins [BR:
luo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HHL09_12780 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HHL09_12780 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_21
AAA_16
AAA_29
SMC_N
AAA_25
nSTAND1
UvrA_DNA-bind
RsgA_GTPase
AAA_23
NACHT
nSTAND3
DnaJ_CXXCXGXG
AAA_15
Anti-TRAP
LTI65_LTI78_N
Motif
Other DBs
NCBI-ProteinID:
QJE96622
UniProt:
A0A858RIF3
LinkDB
All DBs
Position
3056896..3062682
Genome browser
AA seq
1928 aa
AA seq
DB search
MPAKKSSPPSLPPVPGSQVIRIRGARQHNLKGLDLDIPLGQLTVVTGPSGSGKSSLAFHT
LYAEGQRRYVETFSPYVRQFFDRMDKPVVDHIDGIPPAIAIEQKNNIRTTRSTVGTLTEI
NDYLKLLYGRSARGYDPDTGEEIRPDSADSTAAWAFANLTGYQVMVTFPVAIPADTKSAE
LFPFLNQQGYLRVLIGDEIYRTDEPAGEKISDLKKEVSVIQDRLPVTEENRPRLLEALEH
AFTLGKGHVALVFTAKSKAKGAKFEARLFSSTWTNPATGNSLRPPSPALFSFNNPLGACP
KCRGFGRVIGLDLDKSIPDPSLSIKQGVIKPFQGERGEECQRDLLRCAKERGLSVNTPWE
DLEEEEREWVYYGDHSTKGTTGGSTVDMEALEERWRNGEWYGVKGFFDWMETKAYKMHVR
IFLSRYRSYTTCSTCRGKRLQPEALCYKIDGKTLPDLWLLPISDLREWFNVHEASVTDPD
PSLKLILTEITSRLRYLNEVGLGYLTLDRPARTLSGGEIERVNLTTCLGASLTNTLFVLD
EPTVGLHARDIHRLVGVMEGLRDKGNTLVVVEHEEAVMRAADQLLDIGPAAGQHGGQLIF
QGPVSHGRALRSAAPKGKAAKTQQAGTLPWLSGERFIPVPEKRRKPGSKKIEIRGASRHN
LKKLDLDLPLGLFVCLTGVSGSGKSTLSHDVIYANIARKLRKEDSELDPAPIKDLRGTQY
LGDVLLVDQSPLARTPRSTPAVLVGAFDPIRQLFAQTDDAKSRGLNTGFFSFNSGEGRCD
RCAGAGSEKVEMQFLSDLHVTCPDCSGRRYKPSTLDLHYLGKSVADILDLSIDEAIAFYG
ETEGLSTPHTKRHEQVCKLLRPLSEVGLGYLKLGQPLNTLSGGESQRLKLCQLMADAVGK
EDEPAKKKGGKLLILDEPTTGLHFSDIERLLGVFQRLVDAGHSLLVIEHNLDVIKCADWI
LDLGPEAGAKGGKLVAEGSPEHIASLDTETSRFLKPFLKKETELVVSSRLKEEPVPRPVN
RSTNTIQLRGAREHNLKNISIDIPRDRFVVVSGLSGSGKSTLAFDILFAEGQRRFLDSMS
AYARQFAEQLEKPELDSLAGLPPTVAIEQRVSQGGMKSTVATVTELWNFIRLLYAKLGTR
YCPDCGVPVEKQSLAAIEQSIRDLLKKGPVSILAPVIRGRKGYHTEVAEWALKQGFTRLL
VDKQFRDAEGFTRLERFKEHDIDVVVAEVGSDASSRSGTKGKAALSASGKTGLLDPAVIS
RALDIGKGTLKLFTPDKKFLLLSSEASCPSCHQSFEELDPRLFSFNSPHGWCPECRGHGM
VPKHRHHLDTSRYESVLEAEMDADRKIERMEDEELVECPECHGARLNPEARAVRFQGTPL
ANLARLPVDNASGHFEKLTIKGDRESLIARDILPEIRQRLSFLQEVGLGYLQLDRSARTL
SGGESQRIRLAAQLGSNLRGVLYVLDEPTIGLHPRDNAALLETLVALRDRGNSLIVVEHD
EDTIARADHLIDLGPGAGRLGGQIVYQGAPPRVPAPGTAKAAKKRKAKAADVGPSTVDIH
ASPTYRALSNPIIHPSRGERRAVKKDHGFLTVTGCRANNLKEIDVQIPLGRLTVLTGISG
SGKSTLMHSCLAIAAAGQRKGRKDKNAPFAKALNFDKIQSTYEVDQSPIGKTSRSCPATY
VKVFDDIRKLFAQLPDSRVRGYEASRFSFNTGDGRCPVCEGNGRVKLEMDFLPSTWVPCE
ACNEMRYNPATLEVRFREKNIGEVLRMTIEQAAEFFESQPRIAAPLKLLADTGLGYLQLG
QPSPTLSGGEAQRIKLVTELTKGRVSAKNLKTLNRTNLYLIEEPTVGLHLEDVKRLIDVL
HRLVDEGHTVVVIEHHMAVAAEADWILDLGPEAGDQGGTIIAQGPPETVAKSKKSRTAPF
LATVLGVG
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcgaaaaagtcgtcgcccccttcgcttccgcccgtccctggctcccaagtcatc
cgcatccgcggagcccgccagcataacctgaaggggctggatctcgatattccgctcggc
caactcaccgtcgtcaccggtccctccggttccgggaaatcgtcgctcgccttccacacc
ctctacgccgaaggccagcgccgctacgtcgagaccttctcgccctacgtccgccagttc
ttcgaccgcatggacaagccggtcgtcgatcacatcgatggcatcccgcccgccatcgcg
atcgagcagaagaacaatatccgcaccacccgctccacggtcggcacgctcacggagatc
aatgattacctgaagctcctctatggacgctccgcccgtggctatgatccggatacgggt
gaggaaatccgcccggattccgcggactccaccgccgcttgggcattcgccaatctaaca
ggctatcaggtgatggtgacctttcccgtcgccattcccgcggacacgaaaagtgcggag
ctattccccttcctcaatcagcagggttatcttcgcgtcctcatcggcgatgagatctac
cgcaccgatgagcctgctggtgagaagatcagcgacctgaagaaagaggtctctgtcatt
caggaccgccttcctgtcaccgaggaaaaccgcccgcgccttctcgaggcgctcgagcat
gccttcactctgggtaagggccatgtcgcgctcgtcttcactgcgaagtcgaaggccaag
ggcgcgaagttcgaagctcgtcttttctcgtccacttggacgaaccccgccaccggcaac
tctcttcgtccgccgtcgcccgcgctcttctccttcaacaatccgctcggggcttgcccc
aagtgccgcggtttcggccgggtcatcggactcgatctcgacaaatccattcctgatccc
tcgctgagcatcaagcaaggcgtcatcaagcccttccaaggcgagcgcggcgaggagtgc
cagcgcgacctgttgcgctgtgccaaagagcgcggcctcagcgtcaacaccccgtgggaa
gacctcgaagaagaagagcgcgagtgggtctactatggagaccatagtactaagggaact
accggcgggtccaccgtcgatatggaagcgctggaagagcgctggcgcaatggcgaatgg
tatggggtgaagggcttcttcgattggatggagacgaaggcctacaagatgcacgtccgc
atcttcctcagccgctatcgttcctacaccacctgctccacctgccgtggcaagcgcctg
cagccggaagccctctgttacaagatcgatggcaagacccttcccgacctttggcttttg
ccgatctcagacctccgcgagtggttcaatgtccacgaagcctcggtcaccgatccggat
ccctcgctgaagctgatcctcaccgagatcacctcccgcctccgctatctgaatgaagtc
ggcctcggctatctcacgctcgaccggcccgcccgcacgctcagtggcggtgagatcgag
cgcgtgaacctcaccacttgcctcggtgcttccctcaccaacacgctcttcgttctcgat
gagccgaccgtcggacttcacgcccgcgacatccatcgccttgtcggcgttatggaaggc
ctgcgagataagggaaataccctcgtcgttgtggaacatgaagaagccgtgatgcgcgcg
gcggaccagctcctcgacatcggtcccgctgccgggcagcacggtggccaactcatcttc
cagggccctgtctcccatggcagggcgctccgctccgccgcgccgaagggtaaggctgcg
aagactcagcaggccggcaccttgccctggctttccggggaacgcttcatccccgtcccg
gaaaagcgtcgcaagcctggcagcaagaagatcgagatccgcggtgccagccgccacaat
ctcaagaagctcgatctcgatctgccgcttggcctcttcgtctgcctcaccggcgtttcc
ggttccgggaaatccacgctctcgcacgatgtcatttacgcgaacatcgcgcgcaagctg
cgcaaggaggactccgagctcgatcccgccccgatcaaagatctacggggaacgcagtac
ttgggagacgtcttgctcgtcgaccagtcgcctctagcccggaccccgcgctccacgccc
gccgtgctcgtcggggctttcgatcccatccgccagcttttcgcccagaccgatgatgcc
aagtcccgcggactgaataccggcttcttctcgttcaactccggggagggacgctgcgac
cgttgtgccggtgccggcagcgagaaggtggagatgcagttcctctcggacctccacgtg
acctgcccggattgctccggtcgccgctacaagccgtccacgctcgatttgcactacctc
ggcaagtccgtcgccgatatcctcgatctcagcatcgatgaagcgatcgccttttacggc
gaaacggaaggcctgagcactccgcatacgaagcggcatgagcaagtctgcaagctcttg
cgcccgctctccgaagtcggcctcggctacctgaagctcggtcagccgctgaacacgctt
tccggcggcgagtcccagcgcctcaagctttgccaactcatggccgatgccgtggggaag
gaagacgagcccgcgaagaaaaagggcggcaagctgctcatcctcgacgagccaaccacc
ggcctccacttctctgacatcgagcgtctgctcggcgtcttccagcgtctcgtcgatgcc
ggtcacagcctgctcgtcatcgagcacaacctggacgtgatcaagtgcgccgattggatc
ctcgacctcggcccggaagccggcgccaagggcggcaagctcgtcgcggaaggcagcccg
gagcacatcgcgagcctcgacaccgagacctcccgtttcctcaagcccttcctgaagaag
gaaacggaactcgtggtctcgtcccgtctcaaggaagagcccgtcccgcgtccggtcaat
cgttccaccaataccatccaactccgtggcgcccgtgagcacaacctgaagaacatctcg
atcgatatcccgcgggatcgcttcgtggtggtctccggcctcagcggttcgggcaagtcc
acgctcgcctttgatatcctcttcgcggaaggccagcgccgtttcctcgattcgatgtcg
gcttatgcccgccagtttgcggagcagcttgagaagccagaactcgattccctggcgggc
ctgccgccgacggtcgcgatcgagcagcgcgtttcccaaggaggcatgaagtccaccgtg
gcgaccgtcaccgagctgtggaacttcatccgcctgctctacgcgaagctcgggacgcgc
tactgtccggattgtggcgttcccgttgagaagcagtcgctcgccgcgattgaacaaagc
atccgcgatcttctgaaaaaggggcccgtttcgatcctcgcgccggtaatccggggtcgc
aagggctaccataccgaagtcgccgagtgggcgctcaagcagggatttacgagactcctc
gtagacaagcagttccgcgatgccgagggtttcacccgtctcgagcgcttcaaggagcac
gacatcgatgtggttgtcgctgaggtagggtcggacgcctccagccgatcgggaaccaag
ggcaaggctgctctttccgctagcgggaagacgggtctcctcgatcctgcggtgatttcc
cgcgccctcgatatcggcaagggcacgctcaagctcttcacgccggacaagaagttcctc
cttctttccagcgaggccagttgcccgagctgccaccagtccttcgaagagctcgacccg
cgcctcttctccttcaactcgccgcacggctggtgcccggagtgccgcggtcatggcatg
gtgccgaagcatcgtcaccacctcgatacctcccgctatgaatccgtgttggaggcggag
atggatgccgatcgcaagatcgagcgcatggaagacgaggaactcgtcgagtgccccgag
tgtcatggtgcccgcctgaatcccgaggcccgagcggtgcgtttccaaggcacgccgctc
gcgaacctggcgcgcctgccggtggacaatgcttccgggcatttcgaaaagctcacgatc
aagggcgaccgggaatccttgatcgcccgcgatatccttccggagatccgccagcgcctc
tccttcctccaggaagttggcctcgggtatcttcagctggatcgctcggcacgcacgctc
agcggcggcgaaagccagcgcatccgtctcgctgcacagctcggctcgaatctccgcggt
gtcctctacgtcctcgacgaaccgaccatcgggcttcacccgcgcgacaatgccgccctg
ttagaaacgctggtggcgctccgcgatcgcggcaatagcctcatcgtcgtcgagcacgac
gaagacaccattgcccgtgcagatcacctcatcgacctcggtcccggtgccggccgcctc
ggtggccagatcgtttaccaaggagcgcctccgcgagtgcccgctcccggcacggcgaag
gctgcgaagaagcgcaaggcaaaggccgccgatgtcggtccttcgactgtcgatatccac
gcttcgccgacctatcgagcgctctcaaatccgatcatccatccgagccgcggggagcgc
cgcgcggtgaagaaggaccacggcttcctcaccgtcaccggctgccgcgcgaacaatctg
aaggaaatcgatgtccagattccgctgggccggcttaccgttctaacaggtatctcgggc
tccgggaaatcgacgctcatgcattcctgcctcgccattgcggcggcaggccagcggaag
ggcaggaaagacaagaatgctcccttcgcgaaggcgctgaacttcgacaagatccagtcc
acctacgaagtcgaccaatcgccgatcggcaagacctcgcgttcttgccccgccacctac
gtgaaagtcttcgacgatatccggaagctcttcgcccagcttcctgattcccgcgttcgc
ggctacgaagcctcccgtttctccttcaataccggcgatggccgttgccctgtctgcgag
ggcaatggccgcgtgaagctggagatggatttcctgcccagcacctgggtgccctgcgag
gcctgcaacgagatgcgctacaatccggcgacgctcgaagtccgcttccgggaaaagaac
attggtgaagtgctgcgcatgaccatcgagcaggccgccgagttcttcgaatcccagccg
cggatcgccgccccgttgaagctcctcgcggatacgggtctcggttacctccagctcggg
cagccttcgcccacactcagcggcggtgaagcccagcgcatcaagctcgtcaccgaactc
accaagggccgcgtctcagcgaagaacctcaagacgctgaaccggaccaatctctacctc
atcgaagagccgaccgtcggtctccacttggaagacgtgaagcggctcatcgacgtgttg
caccgcctcgttgatgagggacacaccgtcgtcgtgatcgaacaccacatggccgtcgct
gccgaagcggattggattctcgacctcggccccgaagccggtgaccaaggcggaacgatc
atcgcccaaggtccgccggagacggtcgccaagtcgaagaagtcgcgaaccgcacccttc
ctcgcgacggtgctgggggtcggctag
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