Luteolibacter luteus: HHL09_17275
Help
Entry
HHL09_17275 CDS
T06562
Symbol
rpiB
Name
(GenBank) ribose 5-phosphate isomerase B
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
luo
Luteolibacter luteus
Pathway
luo00260
Glycine, serine and threonine metabolism
luo00460
Cyanoamino acid metabolism
luo00630
Glyoxylate and dicarboxylate metabolism
luo00670
One carbon pool by folate
luo00680
Methane metabolism
luo01100
Metabolic pathways
luo01110
Biosynthesis of secondary metabolites
luo01120
Microbial metabolism in diverse environments
luo01200
Carbon metabolism
luo01230
Biosynthesis of amino acids
luo01240
Biosynthesis of cofactors
luo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HHL09_17275 (rpiB)
09102 Energy metabolism
00680 Methane metabolism
HHL09_17275 (rpiB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HHL09_17275 (rpiB)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HHL09_17275 (rpiB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HHL09_17275 (rpiB)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HHL09_17275 (rpiB)
Enzymes [BR:
luo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HHL09_17275 (rpiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
LacAB_rpiB
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Met_gamma_lyase
Gly_rich_SFCGS
Motif
Other DBs
NCBI-ProteinID:
QJE97461
UniProt:
A0A858RLH5
LinkDB
All DBs
Position
4181783..4183456
Genome browser
AA seq
557 aa
AA seq
DB search
MSQKSLRIALGADHGGVDLKDALVAHLKAAGHEVTDFGTQGHESVDYADFANLVGRSVSD
GTQDFGVLCCTSGVGVSIAANRHRHVRAANVRTVEEAVTTRQHNDANVLCLGAKTVDAAT
ATAMVDAFLGTAFEGGRHEVRVCKSSGSRIAETDPDLYAAIVAEEKRQRNNIELIASENF
ASPAVMEAQGSVLTNKYAEGYPGKRWYGGCENVDVVEQLAIDRAKKLFGAEHANVQPHSG
SQANTAVYFSVLKPGDKILTMDLSHGGHLTHGHKANFSGKFYEVVHYGVSKEDEQIDYDH
LAELARETKPALITCGASAYSRVIDFARMAQIAREVGAYLFVDMAHIAGLVAAGVHPNPV
PHADFVTSTTHKSLRGPRGGIILCKEEFAKKIDAQVFPGIQGGPLMHVIAAKAVCFGEAL
KPDFKDYQAQIVKNAQALAARLTSHGYRIVSGGTDNHVMMVDLRPKGLNGADASHALDEA
GITVNKNSIPFDTGTPMKPSGIRIGTPAVTTRGMKEKDVEQVADFIAEALGAIGDEPKLH
AIRDKVFAFNRAFPMPM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagtccctgcgtattgccctcggcgccgatcacggcggagttgacctgaag
gatgccctcgtcgcccacctgaaggccgcgggccatgaggtgacggatttcggaacgcaa
ggccatgaatcggtggactatgcggactttgcgaatctggtgggccgctcggtttccgac
gggacccaggatttcggcgtcctctgctgtacctccggtgtgggcgtgagcatcgccgcg
aaccgccaccgccacgtccgcgcggccaatgtccgtacggtcgaggaagcggtcaccacc
cgccagcacaacgacgcgaacgtcctctgcctgggtgccaagaccgtggatgccgcgacc
gccaccgcgatggtggatgctttcctcggcacggccttcgaaggtggccgccacgaagtc
cgcgtctgcaagtcttccggctcccgcatcgctgagaccgatcctgatctctacgccgcc
atcgtcgcggaagagaagcgccagcggaacaatatcgagctgatcgcttcggagaacttt
gcctctcccgccgtgatggaggcccaagggtccgtactgaccaacaagtatgccgagggc
tatcccggcaagcgctggtatggcggctgcgagaacgtcgacgtggtcgagcaactcgcc
atcgaccgggccaagaagcttttcggtgccgagcacgcgaacgtgcagccgcattccggt
tcccaagcgaacaccgccgtttatttctccgtgctgaagccgggtgacaagatcctgacg
atggatctttcccatggcggtcacctgacccacggccacaaggcaaacttctccggcaag
ttctacgaagtcgttcactacggcgtgagcaaggaagacgagcagatcgactacgatcac
ctcgccgaactggcccgcgagacgaagcccgccctcatcacctgcggtgccagtgcttac
tcccgcgtcatcgacttcgcgcggatggcacagatcgcccgtgaggtgggtgcctacctt
ttcgtggacatggcgcacatcgcaggtttggtcgctgccggagtccatccgaaccccgtg
ccgcacgcggatttcgtgacctccaccactcacaagtccctgcgcggtccgcgcggcggc
atcatcttgtgtaaggaagagttcgcgaagaagatcgacgctcaagtgttcccgggcatc
cagggcggcccgctgatgcacgtgatcgcggcgaaggccgtctgtttcggcgaggctctg
aagccggacttcaaggattaccaggcacagatcgtgaagaacgcgcaggcgctcgccgca
cgcctcaccagccatggttaccgcatcgtctccggcggcaccgacaaccacgtgatgatg
gtcgaccttcgtccgaagggtctcaacggtgccgatgcctcgcacgctctcgatgaagca
ggcatcacggtgaacaagaactcaatccccttcgacaccggtacaccgatgaagccgagc
ggtatccgcatcggcacgccggccgtgaccacccgcggcatgaaggaaaaggacgtggag
caagtggcagacttcatcgccgaagcgctgggcgcgattggtgacgagccgaagcttcac
gcgatccgtgacaaggtgttcgcattcaaccgcgctttccccatgccgatgtaa
DBGET
integrated database retrieval system