Luteolibacter luteus: HHL09_17650
Help
Entry
HHL09_17650 CDS
T06562
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
luo
Luteolibacter luteus
Pathway
luo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HHL09_17650 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
luo03021
]
HHL09_17650 (rpoC)
03400 DNA repair and recombination proteins [BR:
luo03400
]
HHL09_17650 (rpoC)
Enzymes [BR:
luo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HHL09_17650 (rpoC)
Transcription machinery [BR:
luo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HHL09_17650 (rpoC)
DNA repair and recombination proteins [BR:
luo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HHL09_17650 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QJE97530
UniProt:
A0A858RMY4
LinkDB
All DBs
Position
4276259..4280413
Genome browser
AA seq
1384 aa
AA seq
DB search
MNVDTNLRELFGVDERPEAFDQVSITVASPDVIRSWSKGEVKNPETINYRTFKPEKGGLF
CERIFGPTRDWECACGKYKRIKHKGVVCDRCGVEVTLSRVRRERMGHIELAVPVSHIWFY
KCMPSRIGLVLDISARHLERVIYYEDYVVTEPGNTPLERGQLLTENELRDAEDAYGESSF
RASMGAEAIQDLLAQVDLVDLAKQLEQELETTRSKQNKKKLSKRLKITQGFAQSKSRPEW
MIQTVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLQLKTPEVIIRNEK
RMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIV
IGPDLTLNQCGLPKKMALTLFEPFIIRRLKELGYCHTVRSAKKMIDRKTPEVWDILAEVT
KGHPVFLNRAPTLHRLSIQAFEPKLIEGEAIRVHPLVCTAYNADFDGDQMAVHVPLSVEA
QMEARQLMLAPNNIFSPASGRPITTPSQDIILGAYYLTWAPVRTQKDREKQEHLPLFENS
SEVEFAIASRKVGYHQWIRIRNPNFGTNTVFGDSENKILETTPGRVRFNEIWPAGLGFIN
RTVGKKQMSDVIWRCYQVAGQKGTVQTLDALKSLGFREATRSGTSIGIVDMVVPEEKPAI
IKDAYEQVEKVTKQYRNGVITDGERYQKVVDIWTHATDTIASALYRKIEFNDGKPGASPL
FMMVDSGARGNKSQIKQLSGMRGLMAKPSGEIIERPITSNFREGLSVLEYFISTHGARKG
LADTALKTADSGYMTRKLVDVAQDVIVTVQDCGTASGIIVAPIYDGDEEAASLATRIYGR
TSCEQVKDPVTGQIVLDYDQLVDENSAKAVERIGYEKLKIRSVLTCESKRGCCAKCYGLN
LATGKPVKIGEAVGIIAAQSIGEPGTQLTMRTFHVGGVAAATFKQPIIKAKNTGRVVYKD
LRVVESAEGKWVVLNKNGSISIRDKDGLELESHMIVIGSVIEIKDGDDVKKADTVATWDP
YNVPILTEKPGKVEFRDMISGITVTNETDKETGKKVMVVTEHKEDLHPQVVIVDEKTKEV
RASYSIPVGAHLSVKEGEVVTGGTQLAKTPRKVARTKDITGGLPRVAELFEARKPKDACV
IAKIEGEVSFGGTVRGKKKVIVTDTDSGEQVEHLVPMGRHIIVTDGDRVKRGDQITEGPV
SPEDLLEACGAQELQEHLVNEVQSVYRVQGVEINDKHIEIIIRQMLRKVKITDPGDADQL
LWGDQIDRSAFNRINESIVANGGKPAEAEPVLLGITKASLETDSFISAASFQDTTRVLTE
AATLGKVDYLTGFKENVIMGHLIPAGSGFESHRDSDIEFTVEEPEPLFIPEAPESEDAVT
VESA
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgacaccaaccttcgcgaacttttcggcgtggacgagcggccggaggccttt
gaccaggtttccatcacggtcgcatccccggacgtgatccggtcttggtccaagggggaa
gtgaagaaccccgagaccatcaactaccgtaccttcaagcccgagaaaggcggcctcttc
tgcgagcggatcttcggaccgacccgcgactgggagtgcgcctgcggcaagtacaagcgc
atcaagcacaagggcgtggtctgtgaccgctgcggtgtggaagtgacgctgagccgcgtg
cgccgcgagcgcatgggccacatcgagctggccgtgcccgtctcgcacatctggttctac
aagtgcatgccgtcccgcatcggcctggtgctggacatcagcgcccgccatctcgagcgc
gtcatctactacgaggactacgtcgtcaccgagccgggtaacaccccgcttgagcgcggc
caactccttaccgaaaacgaactccgtgatgccgaagatgcttacggcgagtcttccttc
cgcgcctcgatgggtgcggaagccatccaagacctgctcgcgcaggtggatctggtggac
cttgccaagcagcttgagcaggagcttgagaccacccgctcgaagcagaacaagaagaag
ctctcgaagcgcctcaagatcacccaaggcttcgcccagtcgaagtcccgtccggaatgg
atgatccagaccgttcttcccgtgatcccgccggaccttcgtccgttggttccgctggaa
ggtggccgcttcgcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgtaac
aaccgtctcaagaacctcctccagctaaagacgccggaggtcatcatccgcaacgaaaag
cggatgctgcaagaggctgttgacgcgctcttcgacaacggccgccatggccgtgccgtg
accggtgccggcaaccgtccgctcaagtccctcagcgacatgctgaagggcaagggtggc
cgcttccgccagaacctgctcggcaagcgtgtggactactccggtcgttccgtgatcgtg
atcggtccggacctcaccctcaaccagtgcggtctgccgaagaagatggctcttaccttg
ttcgagcccttcatcatccgtcgcctgaaggagctgggttactgccacacggtccgctcg
gccaagaagatgatcgatcgcaagaccccggaagtctgggacatccttgcggaagtgacc
aagggtcacccggtcttcctgaaccgcgcgcccacgctgcaccgtctctcgatccaagct
ttcgaaccgaagctgatcgaaggtgaggcgatccgcgttcacccgctggtctgcacggca
tataacgccgacttcgacggtgaccagatggccgtgcacgtgccgctctcggtggaagcc
cagatggaagcgcgccagctgatgcttgcgccgaacaacatcttctctcccgcctccggc
cgcccgatcaccacgccgtcgcaggacatcattctgggtgcctactacctgacttgggct
ccggtgcgcacgcagaaggatcgcgaaaagcaggagcacctcccgctgttcgagaactct
tcggaagttgaattcgcgatcgcgtcccgcaaggtgggttaccaccagtggatccgcatc
cgtaaccccaacttcgggaccaacaccgtcttcggcgacagcgagaacaagattctggag
accactccgggtcgtgtccgcttcaacgagatctggcctgctggccttggcttcatcaac
cgcaccgtcggtaagaagcagatgtccgacgtcatctggcgctgctaccaagtggctggc
cagaagggcacggtccagacgctggatgcgctgaagagcctcggtttccgcgaagctacc
cgttccggtacgtcgatcggtatcgtggacatggtggttccggaagaaaagccggcgatc
atcaaggatgcctacgagcaggtcgagaaggtcaccaagcagtaccgcaacggtgtgatc
accgatggcgagcgctaccagaaggtcgtcgacatctggacgcacgccaccgacaccatc
gcctccgcgctctatcgcaagatcgagttcaacgacggcaagccgggcgcgagcccgctg
ttcatgatggtggactccggtgcacgtggtaacaagagccagatcaagcagctctccggg
atgcgcggccttatggccaagccgtccggtgaaattatcgagcgcccgatcacctcgaac
ttccgcgaaggtctgtcggtgctcgagtacttcatctcgactcacggcgcccgcaagggt
ctggcggataccgcactcaagacggcggactccggttacatgacccgcaagctcgtggac
gtggcgcaagacgtcatcgtcaccgtgcaggattgcggcaccgccagcggcatcatcgtg
gcgccgatctatgacggcgacgaagaggcagcctcgcttgccacccgtatctacggccgc
acctcgtgcgagcaggtgaaggatccggtgaccggccagatcgtgctcgattacgaccaa
ctcgtggacgaaaactccgcgaaggccgtcgagcgtatcggttacgagaagctcaagatc
cgctccgtgctcacttgtgagtcgaagcgcggttgttgcgccaagtgctacggcctgaac
ctcgccaccggcaagccggtgaagattggtgaagccgtgggtatcatcgccgcccagtcg
atcggtgagcccggcacgcagctgacgatgcgtaccttccacgtcggtggtgtggctgcc
gcaacgttcaagcagccgatcatcaaggccaagaacaccggccgcgtggtttacaaggac
ctccgcgtcgtcgaaagcgccgaagggaagtgggtcgttctgaacaagaacggttccatc
tccatccgtgacaaggacggccttgagctggaaagccacatgatcgtcatcggttccgtc
atcgagatcaaggatggcgacgatgtgaagaaggcagacacggtcgcgacctgggacccc
tacaacgtgccgatccttacggagaagccgggtaaggttgagttccgcgacatgatctcc
ggcatcaccgtcaccaacgagaccgacaaggaaaccggcaagaaggtcatggtggtcacc
gagcacaaggaagacctccatccgcaggtggtgatcgtggacgagaagaccaaggaagtc
cgcgcgtcttactcgattccggtcggcgctcacctttccgtcaaggaaggcgaagtggtc
acggggggcacgcagctcgccaagaccccgcgcaaggtggcccgtaccaaggacatcacc
ggtggtctcccacgtgttgccgagctcttcgaagcccgcaagccgaaggatgcctgcgtg
atcgcgaagatcgagggtgaggtctcctttggtggcaccgtccgcggcaagaagaaggtc
atcgtcaccgacaccgactccggcgaacaggtcgagcacctcgtgccgatgggtcgccac
atcatcgtgaccgatggtgaccgcgtgaagcgtggtgaccagatcacggaaggtcccgtg
tctccggaagacctcctcgaggcttgcggtgcccaggaactccaagagcacttggtgaac
gaggtgcagtccgtttaccgcgtccaaggcgtggaaattaacgacaagcacatcgagatc
atcatccgccagatgctgcgcaaggtgaagatcaccgacccgggcgatgcggaccagctg
ctctggggcgaccagatcgaccgttctgccttcaaccggatcaacgagtccatcgtggcc
aacggtggcaagccggcggaagccgagcctgtcctcctggggatcaccaaggcctcgctg
gaaaccgactccttcatctccgcggcgtccttccaggacaccacgcgcgtgctgacggaa
gcggcgaccctcggcaaggtggactacctcaccggcttcaaggaaaacgtgatcatgggt
cacctcatcccggctggctccggtttcgaatcgcaccgcgattccgacatcgagttcacc
gtggaagagccggagccgctcttcattccggaagccccggaatcggaagacgccgtgacg
gtcgagagcgcttga
DBGET
integrated database retrieval system
