Luteolibacter luteus: HHL09_24840
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Entry
HHL09_24840 CDS
T06562
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
luo
Luteolibacter luteus
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luo03019
]
HHL09_24840
03009 Ribosome biogenesis [BR:
luo03009
]
HHL09_24840
Messenger RNA biogenesis [BR:
luo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HHL09_24840
Ribosome biogenesis [BR:
luo03009
]
Prokaryotic type
rRNA processing factors
HHL09_24840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
baeRF_family5
Motif
Other DBs
NCBI-ProteinID:
QJE98868
UniProt:
A0A858RR52
LinkDB
All DBs
Position
complement(6049285..6050874)
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AA seq
529 aa
AA seq
DB search
MIQKIKRFLGIGKPNPKEGNTVIVNVERLERRVALLDNGVLEEYTVEREGEQNIVGGIFK
GRVKNIEPGLKAMFVDIGLDKNAFLHFWDAIPAALDAGLEEIERASSSKKKQQQKITSKD
IPSIYPIGSEIMIQVSKGPIGTKGPRVTTNISLAGRYLVLMPFTEQFGISRKIEDPKERQ
RLRKIMQKLSVPEGMGIIMRTVAHGTRARHFVRDLAMLMEQWRSVEDKRDSGPAPLCVFQ
EPGLIERTARDFLTDEVDQVLCDDAQTTEFIREIAGKVSRRAKRRIHHLPTTQPIFEAVG
IQKQIDEAFSRQVWLPCGGYIVIDETEALISVDVNTGRNRGSKDVDKMILETNVEAAQEV
ARQLRLRNIGGLVVVDFIDMRHRKDQQTVYKAMKDRLKKDKAKTQVLQISSIGLMEMTRQ
RLNESLRDTMFEPCPYCQGRGRVKTPMTMSVEIQRRIVTVIHKHRDQAGDLVVVVNPDVL
NRFKTEDGKHLVELERQHSGRLIFRSDPSLHRERFVIVDAATEKTIDQA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaatcaaacgcttccttggaatcgggaaaccgaatccgaaggaaggcaac
accgtcatcgtcaacgtcgaacggcttgaacgccgcgtcgccctcctcgataacggggtt
ctcgaagaatataccgtcgagcgcgaaggcgaacaaaacatcgtcggcgggatcttcaag
ggccgcgtaaagaacatcgagccgggcctcaaggccatgttcgtcgacatcggcctcgac
aaaaacgctttcctccatttctgggatgccattccagctgcccttgacgccggtctcgaa
gagatcgagcgcgcgagcagcagcaagaagaagcagcagcagaagatcacctcgaaggac
atccccagcatctatccgatcggatcggaaatcatgatccaggtgtcgaagggccccatc
ggcacgaagggtccccgcgtcacgaccaatatctccttggccggccgctacctggtgctg
atgcccttcaccgagcagttcggtatctcccgcaagatcgaggatccgaaggagcgccag
cgcctgcgcaagatcatgcagaagctgagcgtgcccgaaggcatgggcatcatcatgcgc
accgtggcccacggcacccgcgcccgtcacttcgtgcgggacctcgcgatgctgatggag
cagtggcgttccgtggaagacaagcgtgactccggtcctgctccgctctgcgtcttccag
gagcccggcctgatcgagcgtaccgcccgcgatttcctgaccgatgaagttgatcaggtg
ctttgcgacgacgcccagaccaccgagttcatccgcgagattgccggaaaggtttcccgc
cgcgccaagcgccgcatccatcacctgccgaccacgcagccgatcttcgaagccgtgggg
atccagaagcagatcgatgaggctttctcgcgccaggtgtggctgccttgcggcggttac
atcgtgatcgacgaaaccgaagcgctgatctctgtcgacgtgaatacgggccgcaaccgc
ggctccaaggacgtggacaagatgattctcgaaaccaacgtcgaggcggcccaggaagtc
gcccgccagctgcgcctgcgcaacatcggcggcctggtcgtggtggacttcatcgacatg
cgtcatcgcaaggaccagcagacggtctacaaggcgatgaaagaccgcctgaagaaggac
aaggcgaagacgcaggtcctgcagatttcctccatcggcctgatggaaatgacgcgccag
cgtctcaacgagtccctgcgcgataccatgttcgagccctgtccttactgtcagggacgt
ggccgcgtgaagacaccgatgacgatgagcgtggagatccagcgccgcatcgtaaccgtc
attcacaagcaccgcgaccaggccggcgacctcgtggtcgtggtcaatccggacgtgctc
aaccgcttcaagaccgaggacggaaagcacctcgtcgaactggaacgccagcactccggc
cgcctcatcttccgctccgatccatcgcttcaccgcgagcgcttcgtcatcgtcgatgcc
gccacggagaagacgatcgaccaagcttga
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