Luteolibacter luteus: HHL09_25065
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Entry
HHL09_25065 CDS
T06562
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
luo
Luteolibacter luteus
Pathway
luo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HHL09_25065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luo03019
]
HHL09_25065
Enzymes [BR:
luo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HHL09_25065
Messenger RNA biogenesis [BR:
luo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HHL09_25065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
SMC_N
AAA_22
DEDD_Tnp_IS110
Utp25_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QJE98910
UniProt:
A0A858RRZ8
LinkDB
All DBs
Position
6094169..6095626
Genome browser
AA seq
485 aa
AA seq
DB search
MTPQTFEALPLAAPLQRALRELEYSVPSPIQAQAIPLLLEGRDLLGCAQTGTGKTAGFAL
PILNALNERPRPLKAKTARTLVLTPTRELAVQVAKSFNTYGKHVRFRQTLIYGGVGQNPQ
VAAMRTGVDVLVATPGRLLDLIDQRFLDLSGVEFFVLDEVDRMLDMGFLRDVKRIVAMLP
QQRQSLFFSATLAPSIVELAESILRNPAKVTIAPQSTTAERVEQKVAFIHKEHKRSLLEQ
LLKEQSEASESKLTIVFSRTKHGANKLAKGLTAAGFQADAIHGNKSQAQREKALERFRKG
LVPVLVATDVAARGVDVKDVGLVVNYDLPNEPEAYVHRIGRTGRAGAEGRSVSFCSDEEL
EFLRDIEKIIRMPVPRWDDHHWHKEDLAEKHARGVRIPSAPKPKPQGRSHNGGNRGNQPS
RRPQNGAGNTAGHAPKAGAPAGNASRPSHEAPKQAVSDQAAGTRNPSRRRRSRRGRGRGP
VSRQA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcagacctttgaggcgttgccgctggctgcgcccctgcaacgcgctttgcgc
gaactcgaatattccgtgccttcgccgatccaggcccaggcgattccccttttgttagaa
ggccgcgacctgctcggttgcgcccagaccggcaccggcaagaccgcgggcttcgcgctt
ccgatcttgaatgcgctgaacgagcgcccacgcccgctgaaggcgaagaccgcgcgcact
ctggtactcaccccgacccgcgaacttgcggtccaggtggcaaagagcttcaatacctat
ggcaagcatgtccgcttccgccagaccctgatctacggtggcgtgggccagaacccgcag
gtcgccgcgatgcgaaccggcgtggatgtcctcgtggcgacaccgggacgtcttcttgat
ctcatcgaccagcgcttcttggatctctccggcgtggagttcttcgtgctggatgaagtc
gaccgcatgctcgacatgggcttcctgcgcgatgtgaagcgcatcgttgcgatgcttccg
cagcagcgccaatcgctcttcttctccgctaccttggctccgagcatcgtcgaactggcc
gagtcgatcctgcgcaatcccgcgaaggtgaccatcgcaccgcaatcgaccactgccgag
cgcgttgagcaaaaggtggccttcattcacaaggagcacaaacgctcgctgctggagcaa
ctgctcaaagagcagtccgaggccagtgaatcgaagctcaccatcgtcttcagtcgcacc
aagcatggtgccaacaagctggcaaagggccttaccgctgccggtttccaggcagatgcc
atccacggcaacaagtcccaagcccagcgcgagaaggcgctcgaacgtttccgcaagggc
ctcgtccccgtacttgtcgccaccgatgtggcagcacgtggcgtcgacgtgaaggacgtc
gggctggtggtgaactacgatctgccgaacgaaccggaagcttacgttcatcgcatcggc
cgtaccggtcgcgcaggtgcggaaggccgctccgtgtccttctgctcggatgaagaactc
gagttcctgcgggacatcgagaagatcatccgcatgcccgtgccgcgctgggatgaccat
cattggcataaggaagacttggctgagaagcacgctcgcggtgtgcgcattccatccgcc
ccgaagccgaagccgcagggccgctctcacaatggcggcaaccgtggcaatcagccctcg
cgtcggccccagaacggagccggcaataccgcaggacatgctccgaaagccggagcaccg
gcaggcaatgcatcgcgtccctcgcacgaagcgccgaaacaggctgtcagtgatcaggcg
gcgggaactcgcaatccatcacgtcgtcgccgtagccgccgtggtcgcggtcgcggaccg
gtttcgcgtcaggcttga
DBGET
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