Luteolibacter sp. Populi: ABWK72_02500
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Entry
ABWK72_02500 CDS
T10555
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lup Luteolibacter sp. Populi
Pathway
lup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWK72_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lup03019
]
ABWK72_02500
Enzymes [BR:
lup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABWK72_02500
Messenger RNA biogenesis [BR:
lup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWK72_02500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SMC_N
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
XDA94262
LinkDB
All DBs
Position
633484..634797
Genome browser
AA seq
437 aa
AA seq
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MPSPIQAQAIPLLLEGRDLLGCAQTGTGKTAGFALPILHALHENPKALKPKSARTLVLAP
TRELAVQVAKSFATYGKNVRFRQTMIYGGVGQNPQVAAMRTGVDVLVATPGRLLDLIEQR
HVDLSGVEFFVLDEVDRMLDMGFARDVNKIVAMLPKQRQSLFFSATLAPNIVQLAETILR
NPARVSIQPETTTAERIEQRVAFINKEHKRHLLEQLLGEQSQAGSAKLTIVFSRTKHGAN
KLAKGLCAAGFQADAIHGNKSQAQREKALDRFRKGLTPVLVATDVAARGVDVKDVGLVVN
YDLPNEPEAYVHRIGRTGRAGADGLSVSFCSDEEVEFLRDIEKIIKMPVPSWIDHHWHDA
VLADKYARGVRGPAPVRGGGGSRGGQGRGGNRGGQGQGQGRSDQGGGGGGNSSRRRSGGG
GGGGGGRSRYSAVSSGR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcgccgatccaggcgcaggcgatcccgctcttgttagagggacgcgacctgctg
ggctgcgcgcagaccggcaccggcaagaccgcgggcttcgccctgccgatcctgcatgcg
ctgcacgagaatcccaaggcgctcaagccgaagtcggcccgcaccctggtgctggcaccg
acccgcgaactcgcggtgcaggtggccaagagcttcgccacttatggcaagaatgtccgc
ttccgccagacgatgatctacggcggcgtgggccagaacccgcaggtggcagcgatgcgc
accggcgtggacgtgctggtggcgacgccgggccgcttgctggacctgatcgaacaacgt
catgtcgacctttcgggcgtggagtttttcgtgctggatgaagtggaccggatgctcgac
atgggcttcgcccgcgatgtgaacaagatcgtggcgatgctgccgaagcagcgtcagtcg
ctgttcttctcggcgacgctggcaccgaacatcgtgcaactggcggagacgatcctgcgc
aatccggcgcgggtgagcatccagcctgagaccacgaccgccgagcggatcgagcagcgc
gtggccttcatcaacaaggaacacaagcgccacttgttagagcaacttctgggcgagcag
tcgcaggccggcagcgcgaagctgacgatcgttttcagccgcaccaagcatggcgcgaac
aagctggccaagggcctgtgcgccgccggtttccaagccgatgcgatccacggcaacaag
tcccaggcccaacgcgagaaggcgctcgaccgcttccgcaagggcctgacgcccgtgctg
gtggccaccgatgtggcggcgcgcggcgtggacgtgaaggacgtgggcctggtggtgaac
tacgatctgccgaacgagccggaagcctacgtgcaccgcatcggccggaccggccgtgcc
ggtgccgacggtctctcggtgtccttctgctcggacgaggaagtcgaattcctgcgcgat
atcgagaagatcatcaagatgcccgtgccgagctggattgaccaccactggcatgacgcg
gtgctggccgacaagtatgcccgcggcgtgcgcggaccggcaccggtgcgtggcggcggc
gggtcccgcggcggacaaggccgcggtggcaaccgtggcggccaaggccagggtcaaggt
cgcagtgaccaaggcggtggcggcggtggcaattcatcgcgccgacgcagcggcggtggt
ggtggtggtggtggcggccggagccgctacagtgccgtgagttcgggccgctga
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