Luteolibacter sp. Populi: ABWK72_03000
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Entry
ABWK72_03000 CDS
T10555
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lup Luteolibacter sp. Populi
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ABWK72_03000
Enzymes [BR:
lup01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
ABWK72_03000
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
XDA94357
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Position
780623..782479
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AA seq
618 aa
AA seq
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MAVAVALCRSPAEAEVRVRDEGRSFLLENGEVSARIDKAKATLVSLKRGELELIRGGTGY
WSFSGGSEKGRMQGFPKSTEAKITLAGGATGEVAINCRYDGSPGTWPVNVSFRYALTDTG
EGLYVYGIYEHPAELPGFSIGEARYVVKPDPQVFDFLTVDPERSRKMPTGRDWDEGTEMN
LKEARLLNTGIHKGEVEHKYGYSALFSESPAYGWSSSSKKVGLWMVNPSLEYIAGGPAKP
ELTGHLDVNPGGRPVLLNMWHGSHYGGTYLDVKKGEAWSMVVGPFLLHTNQGSEALAMWK
DAMRTAAAEIKSWPYAWVESPLYAAKARMPVTGRIEVKDPLGKDKAGAMWVGLTVPDYDS
GSRRRGEKVGWQRDGKNYQYWAKAGADGSFRIGSVRPGTYVLRAYADGVLGEFNREEVIV
APGKELALGTLPWQVERAGPVAWEIGVPDRSAREFRNGDRYWTWGHYLDFKKDFPKGVDF
TIGKSDWKKDWNLCQPLMLDDKGGVTGDSVWKLRFDLKEAADHRLRIALCGHRENDRLFV
TINGRPIGDSGRLPENGVMHRDGHRGLLTELDFPIPAAALKTQGNVLELRLTGQVWHQGL
LYDYLRLERVAPKQTTGT
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
ttggccgttgccgtcgctttgtgccggtccccggcggaggccgaggtccgggtgcgcgac
gaggggcggagcttcctgctggaaaatggcgaagtctccgcccggatcgacaaggcgaag
gcgacgctggtttccctgaagcgcggcgagctggagctgatccgcggcggcaccggctac
tggtccttcagcgggggctcggaaaagggtcgcatgcagggcttcccgaaaagcacggag
gcgaagatcaccttggcgggtggagcgaccggtgaggtcgcgatcaattgccgctacgat
gggtcgccgggaacttggccggtcaatgtttcctttcgctatgctctgaccgacacgggg
gaaggactctacgtctatggcatctacgagcacccggcggagctgccgggattctcgatc
ggggaggcccgctacgtcgtgaagccggacccgcaggtcttcgatttcctgacggtggat
cccgagcgctcgcgcaagatgccgaccgggcgggattgggacgaagggaccgagatgaat
ctcaaggaggcgcggctcttgaacacggggatccacaagggcgaggtggagcacaagtat
ggctactccgctttgttctcggaatcgccggcctacggctggtcatcgtcgtcgaagaag
gtcgggctatggatggtgaatccttcgctggaatacatcgcgggcgggccggccaagccg
gaattaaccggccacctcgacgtgaatcccggcggtcggccggtgctgctgaacatgtgg
cacggcagccactatggcgggacttatttggacgtgaagaagggcgaggcgtggtcgatg
gtggtcggccctttccttctccacacgaatcaaggcagcgaggcgctggcgatgtggaaa
gatgcgatgcggaccgcagcggcggagatcaagagctggccctatgcctgggtcgagagc
ccgctctatgcggcgaaggcgcgcatgccggttacgggaaggatcgaggtgaaggatccg
ctcgggaaggataaggcgggtgcaatgtgggtcgggcttaccgttccggattacgattcc
ggatcgcggcggcggggcgagaaggtgggctggcagcgtgatgggaagaactaccagtac
tgggcgaaggcgggtgcggatggcagcttcaggatcggctcggttcgccccggcacctac
gtcctgcgggcctatgccgatggcgtcttgggtgagttcaaccgcgaggaggtgatcgtg
gcgcccggcaaggagctggctttgggaaccctgccatggcaggtcgagcgggccgggccg
gtggcttgggagatcggggttccggaccgcagcgcgcgtgaattccgcaatggcgatcgc
tactggacctggggtcactatctcgatttcaagaaggactttccgaagggggtggacttc
accatcggcaagagcgactggaaaaaggactggaatctctgccaacctttgatgctcgat
gacaagggcggggtgaccggtgactcggtgtggaagctgcgcttcgacctgaaggaagcg
gcggaccaccgcttgcgaatcgcgctctgcgggcatcgcgagaacgaccggcttttcgtg
acgatcaacgggcgacccatcggcgacagcgggcggctgccggaaaatggcgtgatgcac
cgcgacggtcaccgcggcctgctcaccgagctggatttcccgattcccgccgcggccttg
aagacgcaggggaatgtgctggagctgcgcctaacaggccaggtgtggcaccaggggctg
ctctacgattacctgcggctggaacgcgttgccccgaagcagaccacgggcacctga
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