Luteolibacter sp. Populi: ABWK72_10985
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Entry
ABWK72_10985 CDS
T10555
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lup Luteolibacter sp. Populi
Pathway
lup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWK72_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lup03019
]
ABWK72_10985
03400 DNA repair and recombination proteins [BR:
lup03400
]
ABWK72_10985
Enzymes [BR:
lup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWK72_10985
Messenger RNA biogenesis [BR:
lup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWK72_10985
DNA repair and recombination proteins [BR:
lup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWK72_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF7120
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
XDA95896
LinkDB
All DBs
Position
complement(2754153..2756285)
Genome browser
AA seq
710 aa
AA seq
DB search
MIRSPEQVPSAPSKTLIQTPLEALQKHFGHSGFLDGQDRVIEQITSGRDGLVVMPTGGGK
SLCYQLPALCFEGVTLVVSPLIALMKDQVDALVAKGIPATLINSTVSWPEQKERLDGMRS
GKWKLVYVAPERFRAESFLNALEGVEVSLFAVDEAHCLSQWGHDFRPDYMRLGKALDKIG
KPQCIALTATATPMVRADIMDVLKLREPFEVVSGFARPNLSLAITQVEKKQQKYDRIRDI
VRAHKTGIVYCATRKKVDEVAENLASWGVRAIAYHGGMSDKERENAQNIFLQRKADVAVA
TNAFGMGIDRSDVRFVIHFEVPGSIEAYYQEAGRAGRDGEAAHCELLFNYADTRTQEFFI
DGANPGGSVIRQVYQYLLNSADKEYEVHRSIEDITEGADVKNPMAVSSALAALGRSGYIE
RFDVPGKRMRGTRLKRPDVFARALELDEAALDEKDRRDREKLKSMIALCYARACRQQWIL
AYFGEEDADVCGNCDVCRESSGGEQRAPTVEEDIVVRKALSGVARMSRKTSTGWEGKFGR
GKIVQMLCGSRSQEILTGGLDKLSTYGILKSHGTGYVNSLMRSLTDAGLLRVEAGEFPLL
ALTERGEAAMQGKAKYRLAWPSTAPAPAGHELKDQGFDSRLYSLLRDIRGSLAKHEDVPP
YVIFSNKTLEALCRYRPTNVEEGLAVPGIGEAKAQRYLPAFLAALAEWRA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgttcacctgaacaagtgccgtccgcgccatccaagactttaatccagacgccg
ctcgaagctctgcagaagcacttcgggcacagcgggtttctggatggccaggaccgggtg
atcgagcagatcacctcggggcgggacgggctggtggtgatgcccaccggcgggggcaag
tccttgtgctaccagcttcccgcactgtgcttcgagggcgtgaccttggtcgtctcgccg
ctgatcgcgctgatgaaggaccaggtggacgcgctggtggcgaaggggattcccgcgacg
ctgatcaattccacggtgtcgtggccggagcagaaggagcggctggatggcatgcgtagc
ggcaagtggaagctggtctacgtcgccccggaacgcttccgggcggagtctttcctgaat
gccttggagggtgtggaggtctcgctcttcgccgtcgatgaagcgcactgcctgagccag
tggggtcatgatttccgaccggactacatgcggctgggcaaggcgctcgacaagatcggc
aagccgcaatgtatcgccctcactgccaccgccacgccgatggtgcgggcggacatcatg
gacgtgctcaagctgcgcgagcccttcgaggtggtcagcggcttcgcccggccgaacctg
tcgctggcgatcacgcaggttgaaaagaagcagcagaagtacgaccggatccgcgacatc
gtgcgggcccacaagaccggcatcgtctactgcgcgacccgcaagaaggtggacgaggtc
gcggagaatctcgcctcctggggcgtgcgcgcgatcgcctaccacggcgggatgagcgac
aaggagcgggagaacgcgcagaatatcttcctgcagcgcaaggcggacgtggcggtggcg
acgaatgccttcggaatggggatcgatcgctcggacgtgcgcttcgtgatccatttcgag
gtgcccggtagcatcgaggcctattaccaagaggccggccgcgcgggtcgcgatggcgag
gcggcgcactgcgagctgctcttcaactatgcggacacgcggacgcaggaattcttcatc
gatggcgcgaatcccggcggttccgtgatccggcaggtttaccaatatcttctgaatagt
gccgacaaggagtacgaggtccatcgtagcatcgaggacatcaccgaaggggcggacgtg
aagaacccgatggcggtgagcagcgcgctggcagcgctgggcagatccggctacatcgag
cgcttcgacgttcccggcaagcggatgcgtggcacccgcctcaagcggccggatgttttc
gcgagagcgctggagttggacgaagccgcgctcgacgaaaaggaccgccgcgaccgcgag
aagctcaagtcgatgattgcgctctgttacgcgcgggcctgccgccagcagtggatcctg
gcttacttcggggaggaggatgccgatgtctgcgggaactgcgacgtgtgccgcgagagc
agcggcggcgagcagcgcgcgccgacggtcgaggaggatatcgtggtgcgcaaggcgctg
agcggcgtggcccgcatgtcgcgcaagacttccaccggctgggaaggcaagttcggccgc
ggcaagatcgtgcaaatgctctgcggcagccgctcgcaggagattctaacaggcggcctc
gacaagctcagcacctacgggatcctgaagtcgcatggcaccggctacgtgaactcgctg
atgcgttcgttgacggacgccgggctgctgcgcgtggaagcgggcgagtttccgctgctc
gcgctcaccgagcgcggcgaggcggcgatgcaggggaaggcgaagtatcgcttggcctgg
ccgtcgacagcgcccgcccccgcgggtcatgaactgaaggaccagggcttcgactcccgg
ctctactcgctgctgcgcgatatacggggcagcttggccaagcacgaggacgttccgccc
tacgtcattttcagcaataagacgctcgaggcgctgtgccgctaccgcccgaccaatgtc
gaggaagggttggcggtgccggggataggcgaggcgaaggcgcagcgctatctgccggcg
tttcttgcggcgctggcggagtggcgagcctga
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