Luteolibacter sp. Populi: ABWK72_11315
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Entry
ABWK72_11315 CDS
T10555
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lup Luteolibacter sp. Populi
Pathway
lup03020
RNA polymerase
Brite
Enzymes [BR:
lup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABWK72_11315 (rpoC)
Transcription machinery [BR:
lup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABWK72_11315 (rpoC)
DNA repair and recombination proteins [BR:
lup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABWK72_11315 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDA95959
LinkDB
All DBs
Position
complement(2830488..2834645)
Genome browser
AA seq
1385 aa
AA seq
DB search
MNVDTNLRELFGVDERPEAFDQVSITVASPDIIRSWSKGEVKNPETINYRTFKPEKGGLF
CERIFGPTRDWECACGKYKRIKHKGVVCDRCGVEVTLSRVRRERMGHIELAVPVSHIWFY
KCMPSRIGLVLDISARHLERVIYYEDYVVTEPGNTPLERGQLLTENELRDAEEAYGETSF
RAAMGAEAIQDLLAQVDLADLAIKLEQELETTRSKQNKKKLSKRLKITQGFAGSKSRPEW
MIQTVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLQLKTPEVIIRNEK
RMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIV
IGPDLTLNQCGLPKKMALTLFEPFIIRRLKELGYCHTVRSAKKMIDRKTPEVWDILAEVT
KGHPVFLNRAPTLHRLSIQAFEPKLIEGEAIRVHPLVCTAYNADFDGDQMAVHVPLSVEA
QMEARQLMLAPNNIFSPASGRPITTPSQDIILGAYYLTWAPVRTQKDREKQEHLPLFENS
SEVEFAIASRKVGYHQWIRIRNPNLGKDTVFGDKESKILETTPGRVRFNEIWPEGLGFIN
RTIGKKQMSDIIWRCYQVSGQKGTVTTLDALKSLGFREATRSGTSIGIVDMVVPEEKPAI
IKDAYEQVEKVTKQYRNGVITDGERYQKVVDIWTHATDTIASALYRKIEFNDGKPGASPL
FMMVDSGARGNKSQIKQLSGMRGLMAKPSGEIIERPITSNFREGLSVLEYFISTHGARKG
LADTALKTADSGYMTRKLVDVAQDVIVTQFDCNTANGIVVAPIYDGDEEAASLATRIYGR
TSCEQVKDPVTGQIALDVDELVDEISAKAVERIGYEKLKIRSVLTCESKRGCCAKCYGLN
LATGKPVKIGEAVGIIAAQSIGEPGTQLTMRTFHVGGVAAATFKQPIIKAKNTGIVVYKE
LRVVESAEGKWVVLNKNGSVSIRDKEGLELESQLIVIGSVIEIKDGDDVKKGDTVATWDP
YNVPILTEKPGKVEFRDMISGITVTNETDKETGKKVIVVTEHKEDLHPQVVIVDEKSKEV
RASYSIPVGAHLSVKEGEVVTGGTQLAKTPRKVARTKDITGGLPRVAELFEARKPKDACV
IAKIEGEVSFGGTVRGKKKVIVTDADSGEQVEHLVPMGRHIIVTDGDIVKRGDQITEGPV
SPEDLLEACGAQELQEHLVNEVQSVYRVQGVEINDKHIEIIIRQMLRKVKITDPGDADQL
LWGDQIDRSTFNRINDGIVASGGKPAEAEPVLLGITKASLETDSFISAASFQDTTRVLTE
AATLGKIDYLTGFKENVIMGHLIPAGSGFDCHRDSDIEFTVDEPEPIFVPAVREPEDAVI
ESATA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgacaccaaccttcgcgaacttttcggcgtggacgagcggccggaggccttt
gaccaggtctccatcaccgtagcctccccggacatcatccggtcctggtccaagggggaa
gtaaagaaccccgagaccatcaactaccgcaccttcaagcctgagaagggcggcctattc
tgcgagcggatcttcggaccgacccgcgactgggagtgcgcctgcggcaagtacaagcgg
atcaagcacaagggtgtggtctgcgaccgttgcggcgtggaagtgacgctgagccgcgtg
cgccgcgagcgcatgggccacatcgagctggccgtgccggtctcgcacatctggttctac
aagtgcatgccttcgcgcatcggcctggtgctggacatcagcgcccgccacctggagcgc
gtcatttactacgaggactacgttgtcaccgaaccgggcaataccccgctcgagcgcggc
cagcttctcaccgagaacgaactccgcgatgccgaagaggcatacggtgagacctccttc
cgcgctgccatgggtgccgaggcgatccaggatctgcttgcgcaggtcgatctggccgat
ctcgcgatcaagctggagcaagagctggagaccacccgctcgaagcagaacaagaagaag
ctctccaagcgcctcaagatcacccagggcttcgcgggttccaagtcgcgtccggaatgg
atgatccagaccgtgctgccggtgatcccgccggacctgcgcccgctggtcccgctggaa
ggtggccgctttgcgacctccgacttgaacgacctctaccgtcgcgtcatcaaccgcaac
aaccgtctcaagaacctcctccagctcaagacgccggaggtcatcatccgcaacgaaaag
cggatgctgcaagaggccgtcgacgcgctcttcgacaacggtcgccacggccgtgctgtc
accggtgctggcaaccgtccgctgaagtccctgagcgacatgctcaagggcaagggcggc
cgtttccgccagaacttgctgggcaagcgcgtggactactcgggccgctcggtcatcgtg
atcggtcccgacctcacgctgaaccagtgcggtctgccgaagaagatggctctgaccctg
ttcgagcccttcatcatccgccgcctcaaggagctgggctactgccacaccgtgcgctcg
gccaagaagatgatcgaccgcaagaccccggaggtctgggacatcctggccgaagtgacc
aagggtcacccggtcttcctgaaccgcgccccgaccctccaccgtctctcgatccaggcc
ttcgaaccgaagctgatcgaaggcgaagccatccgcgtccacccgctcgtctgcacggct
tacaacgccgacttcgacggtgaccagatggccgtgcacgtgccgctctcggtcgaggcc
cagatggaagcgcgccagctgatgcttgctccgaacaacatcttctcgcccgcgtccggt
cgcccgatcacgacgccgtcgcaggacatcattctgggtgcctactacctcacgtgggct
ccggtgcgcacgcagaaggaccgcgagaagcaggagcacctgccgctgttcgagaactcc
tcggaagtcgagttcgcgatcgcctcgcgcaaggtcggctatcaccagtggatccggatc
cgcaatcccaacctcggcaaggacaccgtcttcggcgacaaggagagcaagatcctcgag
accaccccgggccgcgtccgcttcaatgaaatctggcccgagggcctcggcttcatcaac
cgcaccatcggtaagaagcagatgtccgacatcatctggcgttgctaccaggtctccggc
cagaagggcaccgtcacgacgctcgatgcgctcaagagcctcggcttccgcgaagccacc
cgctccggcacctcgatcggtatcgtcgacatggttgtcccggaagaaaagccggcgatc
atcaaggatgcctacgagcaggtcgagaaggtgaccaagcagtaccgcaacggcgtcatc
accgacggcgagcgctaccagaaggtcgtcgacatctggacccacgccacggacaccatc
gcctccgcgctctatcgcaagatcgagttcaacgacggcaagccgggtgcgagcccgctg
ttcatgatggtcgattccggcgcccgcggtaacaagagccagatcaagcagctctccggg
atgcgcggcctgatggccaagccctccggtgaaatcatcgagcgcccgatcacctcgaac
ttccgcgaaggtctgtcggtgctggaatacttcatctccacccacggcgcccgcaagggt
ctggcggataccgcgctcaagaccgcggactccggctacatgacccgcaagctggtggac
gtcgcccaggatgtgatcgtcacgcaattcgactgcaacacggccaacggcatcgtcgtc
gccccgatctatgacggcgatgaagaggctgcctcgctggcgacccgcatctacggccgc
acctcgtgcgaacaggtcaaggatccggtcaccggccagatcgcactcgatgtcgacgaa
ctggtggacgagatctcggcaaaggcggtcgaacgcatcggctacgagaagctcaagatc
cgctcggtcctgacctgcgaatcgaagcgcggttgctgcgcgaagtgctacggcctgaac
ctcgccaccggcaagccggtgaagatcggcgaagcggtcggcatcatcgccgcacagtcg
atcggggagcccggcacgcagcttacgatgcgtaccttccacgtcggtggtgtggccgct
gcaacgttcaagcagccgatcatcaaggccaagaacaccggtatcgtggtttacaaggaa
ctccgcgtggtcgaaagcgccgagggcaagtgggtcgtgctgaacaagaacggctccgtc
tccatccgcgacaaggaaggccttgagctggaaagccagctcatcgtcatcggctcggtc
atcgagatcaaggatggcgacgacgtgaagaagggcgacaccgtggcgacatgggatcct
tacaacgtgccgatccttaccgagaagccgggcaaggtggaattccgcgacatgatctcg
ggcatcaccgtcaccaacgagacggacaaggaaaccggcaagaaggtcatcgtggtcacc
gagcacaaggaagaccttcacccgcaggtggtgatcgtggacgagaagagcaaggaagtc
cgcgcatcttactcgatcccggtcggcgctcacctttccgtcaaggaaggggaagtggtc
acggggggcacgcagctcgccaagaccccgcgcaaggtggcccgcaccaaggacatcacc
ggtggtctgccgcgtgtggccgagctcttcgaggcccgcaagccgaaggacgcttgcgtc
atcgcgaagatcgagggcgaggtttccttcggcggcaccgtccgcggcaagaagaaggtc
atcgtcaccgatgccgactccggcgagcaggtcgagcacttggtcccgatgggccgtcac
atcatcgtcaccgacggtgatatcgtgaagcgcggcgatcagatcaccgaaggccccgta
tctccggaagacctcctcgaggcttgcggcgcacaggagctgcaggagcacttggtcaac
gaggtgcagtccgtttaccgcgtccaaggcgtggaaatcaacgacaagcacatcgagatc
atcatccgccagatgctgcgcaaggtgaagatcaccgatccgggcgacgccgatcagctc
ctctggggcgaccagatcgaccgctcgaccttcaaccgcatcaacgacggcatcgtcgcc
agcggtggtaagccggcggaagccgaaccggtgctgctcggcatcaccaaggcctcgctc
gaaaccgactccttcatttccgcggcgtccttccaggacaccacccgcgtgctgacggaa
gcggccaccctcgggaagatcgactacctcaccggcttcaaggaaaacgtgatcatgggt
cacctcatccccgccggttccggcttcgattgccaccgcgactcggacatcgagttcacc
gtggacgagcccgagccgatcttcgtgcccgccgtgcgcgagcccgaagacgcggtgatc
gagagcgcgaccgcgtga
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