Luteolibacter sp. Populi: ABWK72_12370
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Entry
ABWK72_12370 CDS
T10555
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lup Luteolibacter sp. Populi
Pathway
lup03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABWK72_12370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lup03400
]
ABWK72_12370
DNA repair and recombination proteins [BR:
lup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWK72_12370
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWK72_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_16
Microtub_bd
SWI2_SNF2
MEDS
DUF87
AAA_22
TrwB_AAD_bind
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
XDA96163
LinkDB
All DBs
Position
3071117..3073297
Genome browser
AA seq
726 aa
AA seq
DB search
MSFQLTSDYSPEGDQAQAIAKLVKSIRAGNNHQTLLGVTGSGKTFTMANVIEQIGRPTLI
MSHNKTLAAQLYSEFKNFFPHAAVEYFVSYFDYYQPEAYIPRTDTYIEKDSSINDEIERL
RLSSMGSLLTRDDTIVIASVSCIYGLGSPDDYQGMMVPTWVGQQVRRDDFLQSLVAILFE
RNDIAFGRGKFRVRGDVVEVHPAYLDETAVRVEFFGDEIDRITTINTLTGETVDRVDKHT
FFPAKQFVTPGDKMKRAIVEIRKEADERITWFEKEGKLIEAQRLRMRTDYDIEMMQEMGF
CQGIENYSRHLTGRPPGSRPHTLLDFFPKDYLLMIDESHATIPQVGGMYEGDKSRKTVLV
DHGFRLPSALDNRPLKFDEFMQMTNQRLYVSATPGPFEIVNSRPDNKRYIPVKGRGDDRG
FTHIDLKQLKVTPSGSAEPVSAFDPGKPGKALVVEQIIRPTGLLDPTLILRPLKHQIDET
IEFCRQRVERGERVLVTTLTKKTAEDLSEYLQGTGLKVRYIHADIDTVERVEILRQLRAA
AFDILVGINLLREGLDLPEVSLVCILDADKEGFLRNETSLIQTAGRAARHINGQCVLFCN
SVTDSIQRLIDVTEYRRSRQQEHNEKHNITPQGVKRAVQESLQLYSNQREQADKLNRSMV
AEDEETYDKVRVLAELEKEMLDASAKLEFERAAHLRDQINTLKDQTPAATAPRQKVAYPK
GRGRKR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccagctcaccagcgactattccccggagggcgatcaggctcaggcgatcgcg
aagctcgtgaaatcgatccgggcggggaacaaccaccagacgctgctgggggtaaccggc
tcggggaagaccttcacgatggcaaacgtgatcgagcagatcgggagaccgacgctgatc
atgagccacaacaagacgctggcggcgcagctctactcggagttcaagaacttcttcccg
cacgccgcggtggagtacttcgtctcctacttcgactactaccagccggaggcctacatc
ccgcggacggacacctacatcgagaaggactcgtcgatcaacgacgagatcgagcggctg
cggctgtcatcgatgggctccttgctcacccgcgatgacaccatcgtgatcgcctcggtg
tcctgcatctacggcttgggctcaccggacgactaccagggcatgatggtcccgacttgg
gtgggccagcaggtgcggcgggacgacttcctgcaatcgctggtggcgatcctcttcgag
cgcaacgacattgccttcggccgcggcaagttccgcgtgcgtggcgacgtggtcgaagtg
catcctgcttatctcgacgagacggcggtgcgggtggaatttttcggcgacgagatcgac
cgcatcacgacgatcaacacgctgaccggtgagacggtcgaccgggtggacaagcacacc
ttcttcccggcgaagcaattcgtgacgcccggggataagatgaagcgagcgatcgtcgag
atccggaaggaggccgacgagcggattacctggttcgagaaggagggcaagctgatcgag
gcccagcggctgcggatgcgcaccgactacgacatcgagatgatgcaggagatgggcttc
tgccaggggatcgagaactactcgcgccacctgaccgggcggccgccgggatcgcgaccg
cacacgctgctcgatttcttcccgaaggactacctgctgatgatcgacgagagccacgcc
acgatcccgcaggttggcgggatgtatgagggcgacaagagccgcaagacggtgctggtc
gatcacggtttccgcctgcccagcgcgctggataaccggccgctgaaattcgacgaattc
atgcagatgacgaaccagcggctctacgtctcggcgacgcccgggcccttcgagatcgtc
aactcgaggccggacaacaagcgctacatcccggtgaagggccgtggcgatgatcgcggc
ttcacgcacatcgatctcaagcaactgaaggtcacgccgagcggtagcgcggagccggtc
tcggccttcgatccgggcaagcctggcaaggcgctggtggtcgagcagatcatccgtccg
accggcctgctggacccgacgctgatcctgcgcccgctgaagcaccagatcgacgagacg
atcgagttctgccgccagcgggtcgagcgcggcgagcgcgtgctggttacgacgctgacc
aagaagaccgccgaggatctttcggaatacctgcaaggcaccggcctgaaggtccgctac
atccatgcggacatcgacacggtcgagcgggtggagatcctgcgccagctccgcgccgca
gccttcgacatcctcgtgggcatcaatctgctccgcgagggtctcgacctgccggaggtt
tcgctggtgtgcattctcgatgcggacaaggagggtttcctccgtaacgagaccagcctg
atccagacggcgggccgggccgcgcgccacatcaatggccaatgcgtgcttttctgcaac
tcggtcacggactcgatccagcgcctgatcgacgtcacggaataccgccgcagccgccag
caggagcacaacgagaagcacaacatcacgccgcagggtgtgaagcgtgcggtccaggag
agcctgcagctctactcgaaccaacgcgagcaggcggacaagctgaaccgttcgatggtg
gccgaggacgaggagacctacgacaaggtgcgcgtgctggccgagctcgaaaaggagatg
ctcgatgcctccgcgaagctggaattcgaacgcgccgcccacttacgagaccagatcaac
accctgaaggaccagactccggcagcgaccgcgccgcggcagaaggtggcgtatccgaag
ggccggggccggaaacggtag
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