Luteolibacter sp. Populi: ABWK72_14225
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Entry
ABWK72_14225 CDS
T10555
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lup Luteolibacter sp. Populi
Pathway
lup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWK72_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lup03019
]
ABWK72_14225
03400 DNA repair and recombination proteins [BR:
lup03400
]
ABWK72_14225
Enzymes [BR:
lup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWK72_14225
Messenger RNA biogenesis [BR:
lup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABWK72_14225
DNA repair and recombination proteins [BR:
lup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABWK72_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TniB
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
XDA91302
LinkDB
All DBs
Position
complement(3496576..3498492)
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AA seq
638 aa
AA seq
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MPGDAIHDLLSTRFGHPEFRGGQREVVEGLLAGRSMLAVFPTGGGKSLCYQLPALMLEGV
TLVVSPLIALMKDQVDALRAKGVVAARLDSTLEREEYNAVISSLGNGSLKLLYVAPERLS
NEAFRARLKKLKISLVAIDEAHCISEWGHNFRPDYLKLSKLCRDLKVPRVLCLTATATPG
VATDIRAAFKIAKKDHVQLSFHRSNLDLRVAPLQGGQRKQHLLRRLRESEGAAIVYVTLQ
HTAEEVATFLQKSGLAARAYHAGMPDEFRAEAQEAFMAGRTRVIVATIAFGMGIDKADIR
AVYHYNLPKSLENYTQETGRAGRDGKLSTCELLACGDDLVTLENFTYGDTPSPAATRHLV
DHILRLGNEFDVSTYELSGVNDVRPLVVNTLLTYLELEGLIEATRLFWSSWQARLLRGLE
PMLAGYDERRKTFLRKIFAAASEGRSWHTFEVSEVAMKTGEDPQRITDALTYLEEAGDLA
LKKSGVRQGYRITKDPGDLRELATRLDEKFRKREQADLDRLREVVELAEQTGCITAFVTS
HFGEQLASPCGHCDRCRGVPPQVIPRTSHRTPSDEDLRAIRQLFDERHAALKTPRQLARF
LCGISSPAVMRARLGRHDSFGLLEHMPFAEVLTVAEAL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggtgatgccatccacgacctgctcagcacccgcttcggccaccccgaattccgt
ggtggccagcgcgaggtggtggagggtctgctggccggtcgctcgatgctggcggtcttc
cccaccggcggcgggaaatccctgtgctaccagcttcccgccctgatgctggagggcgtg
accctggtggtttcgccgttgatagccctgatgaaggaccaggtggacgccctgcgcgcg
aagggtgtcgtcgccgcgcgtctcgattcgaccttggaacgggaggaatacaacgccgtc
atcagctccctcggcaatggttccctaaaactgctctacgtggcacccgagcggctctcg
aacgaggccttccgcgcccgcctcaagaaactgaagatctcgctggtggcgattgacgag
gcgcattgcatttccgagtggggccataacttccgcccggactacctgaagctgtcgaag
ttgtgccgcgacctgaaagtcccgcgcgtcctctgcctgaccgccaccgccacgccggga
gtggctacggatatccgtgccgccttcaagatcgccaagaaggatcacgtccagctcagc
ttccaccgctcgaatctcgacttgcgcgtcgccccgctgcagggcggccagcgcaagcag
cacctgctgcgccgcctgcgcgagagcgagggcgcggccatcgtctatgttacccttcag
cacaccgcggaagaggtcgcgaccttccttcagaagagtggcctcgcggcgcgcgcctat
catgcgggcatgccggatgaattccgcgccgaggcgcaggaggccttcatggccggtagg
acccgggtcattgtcgccacgatcgccttcggcatgggcatcgacaaggccgacatccgc
gccgtctatcactacaatctaccgaagagcctggagaactacacccaggagaccggccgc
gccggccgcgatggcaagctctcgacctgcgagctgctcgcttgcggagacgacctcgtg
accctggagaatttcacctatggcgacacgccttcaccggctgcgacaagacatctggtc
gatcatatccttcgtctcgggaatgagttcgatgtctcgacctacgagttgtccggcgta
aacgacgtccggcctctcgtggtgaataccctgctcacttacctggagctggaggggctg
atcgaggccacccggctattctggtcgtcctggcaagcgcgcctgctacgcggactcgag
ccgatgctcgccggttacgatgagcggcggaagaccttcctgcgcaagatcttcgccgcc
gccagcgaaggccgcagttggcacactttcgaggtttccgaagtcgcgatgaaaaccggc
gaggacccgcagcggatcaccgacgcgctcacctatctggaagaagcgggcgatctggca
ctcaagaagtccggggtgcgccaaggctatcgcatcaccaaggatcccggggatctccgc
gagctggcgacccggctcgatgagaaattccgcaagcgcgagcaagcggatctcgatcgc
ctgcgggaggtggtggaactcgccgagcaaaccggctgcatcacggccttcgtcaccagc
cacttcggcgagcaactcgcgagcccctgcggccattgcgaccgctgccgcggcgttcct
ccgcaggtgatcccgcgcacgagccaccgcactccttccgatgaggacttgcgggcgatc
cgccagctattcgacgagcgccatgccgccctcaagactccgcgccagctcgcgcgcttc
ctatgcggtatttccagccccgccgtcatgcgtgcccgcctcggccgccacgactcgttc
gggttactcgagcacatgccctttgccgaggttctgaccgtggcggaggcactatag
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