Luteolibacter sp. Populi: ABWK72_18965
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Entry
ABWK72_18965 CDS
T10555
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lup Luteolibacter sp. Populi
Pathway
lup03030
DNA replication
lup03430
Mismatch repair
lup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWK72_18965 (dnaE)
03430 Mismatch repair
ABWK72_18965 (dnaE)
03440 Homologous recombination
ABWK72_18965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lup03032
]
ABWK72_18965 (dnaE)
03400 DNA repair and recombination proteins [BR:
lup03400
]
ABWK72_18965 (dnaE)
Enzymes [BR:
lup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWK72_18965 (dnaE)
DNA replication proteins [BR:
lup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWK72_18965 (dnaE)
DNA repair and recombination proteins [BR:
lup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWK72_18965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XDA92213
LinkDB
All DBs
Position
4666838..4670302
Genome browser
AA seq
1154 aa
AA seq
DB search
MSDSFVHLHLHTEYSLLDGMARTKEVAAKTKELGMPAVAMTDHGNLFGAIEFYQACKKAG
IKPIFGCEIYLAPFSMEDKKDIPGRKRACHMTLLAETDEGWSNLQKLVSLGHLEGLYHGK
PRVDREALRRFAKGIICLTGCISGPVNEWLLLGDEAKARETMAELVDIFGKENTYVEIHI
HDLEPQRKITPGLLKLAKEFDLKPVAANDVHFLNKNDHDAHDVMICIGTGRLVIDENRMH
YTPEVYFKTAEEMRALFAEIPGACDATLEIAERCNVSLRLDSTSSEKYPQFGTPDGSPRE
EYLMRVCQEGLVKRYGEEKAVREDIQERIKYEVGIINQLGFASYFLITADFIQWARDHDI
PVGPGRGSAAGSLVAYAMGITNICPLDFGLLFERFLNPERVSPPDVDIDFCQSRRPEVID
YVRQKYGEKSVSHIITYGTLGAKSVIRDVARVMGVSYGEADRIAKMIEPKPGVTLKGEFD
SKPELKDLIESSSTYKDLWDFATKLEGLTRNVGIHAAGVVIGDRSLDEHVPLTRGNEGEV
VTQYDMNAITEVGLLKMDFLGLKNLTVIHDAVGHIRVHQPDFDIEKVPLDDKPTFDILNR
GETMGVFQLESGGMVETCRKYQIEKIDDIIDLLALYRPGAMQFIDQMIEVKKGRKKPFYE
HPLLEQVCGNTYGVMIYQEQVQNAAKVLAGYTLGGADLLRRAMGKKDPKKMAEERSKFVE
GAGRVNNINEKLANAIFEKIEMFAGYGFNKSHSACYGHISYWTAYLKANFPVEFMAALLS
NEINNTDKIGVFVAECHRMAIEILPPDLNRSKLRFAPEQLPSGVFAIRYGLAAIKNVGEG
AMAQAIADREAKGHFASLEEFSNRLDSKSVNKRILENLVKAGALDWTGDTRAQMFNRLEQ
VVASASSAQKDRASGQVSLFDTMDFAASAPASTATAVAVEEWTKDERLAQEKELLGFYVT
GHPLDKFRGVLDSDKYMRLGLLDEIDVTNPRDRFPFAGMIRTLEAKITKSGKPFGVMVVE
DFTGSAEVVMWGESFVPARDAGTLAPGKVIKFKAAIQVDDRTESRRLTGYELNELKPRGS
SATKGALELTLWTARHSERDLAEIRNALAANPGKVPVFLHFQNSAGRRATLELSESYRVK
RTDLLEKALGRWMD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccttcgtccacctccaccttcacaccgaatattccctcctcgacggcatg
gcccggaccaaggaggtggcggcgaaaacgaaggaactcgggatgccggcggtggcgatg
accgaccacggcaacctcttcggcgcgatcgagttttaccaggcctgcaagaaagcgggg
atcaagccgatcttcggctgcgagatctacctcgcgcccttctcgatggaggacaagaag
gacatccccggacgcaagcgcgcctgccacatgacccttctcgccgaaacggacgagggc
tggagcaatctccagaagctcgtctcgctcggccacctcgaaggcctctaccacggcaag
ccgcgcgtggaccgcgaggccctgcgccgcttcgcgaaaggcatcatctgcctcaccggt
tgcatttccggcccggtgaacgaatggctgctcctcggcgatgaggcgaaggcccgcgag
accatggccgaactggtggacatcttcggcaaggagaacacctacgtcgaaatccacatc
cacgatctcgaaccgcagcgcaagatcacgccgggcctgctcaagctggcgaaggaattc
gacctcaaaccggtcgccgcaaatgacgtccacttcctcaacaagaacgatcatgacgcg
cacgacgtgatgatctgcatcggcaccggtcgcctggtgatcgatgagaaccggatgcac
tacacaccggaggtctacttcaagaccgcggaggaaatgcgcgcgctcttcgccgagatc
cccggtgcctgcgatgcgaccttggaaatcgcggagcgctgcaatgtctccctcaggctc
gactccaccagctccgagaagtatccgcagttcggcacgcccgatggctcgccgcgcgag
gaatacctgatgcgcgtttgccaggaaggcctggtaaagcgctacggcgaagaaaaggcc
gtccgcgaggacatccaggagcgcatcaagtacgaagtcggcatcatcaaccaactcggc
ttcgcttcctacttcctgatcaccgcggacttcatccagtgggcccgcgatcatgacatt
cccgtcggaccgggccgcggttccgcggcgggctcgctcgtcgcctacgcgatgggcatc
accaatatctgcccgctcgatttcggcctgctcttcgagcgcttcctcaatcccgagcgc
gtcagcccgcccgacgtcgatatcgacttctgccagagccgccgcccggaagtcatcgac
tacgtccgccagaagtacggcgagaagagtgtgtcccacatcatcacctacggcaccctc
ggcgcgaagagcgtgatccgggacgtcgcacgcgtgatgggcgtgagctacggcgaggca
gaccgcatcgccaagatgatcgagcccaagcccggcgtgaccctgaagggcgagttcgac
tcgaagcccgagctgaaggacctcatcgaaagctcctccacctacaaggacctctgggac
ttcgcgaccaagctggaaggcctgacccgcaatgtcggcatccacgccgccggcgtcgtg
atcggggaccgctcgctagatgagcacgtcccgctgacacgcggcaatgaaggggaagtc
gtcacccagtacgacatgaatgcgatcaccgaggtcggcctcctgaagatggacttcctc
ggtctgaagaaccttaccgtgatccatgatgcggtggggcacatccgcgtccaccagccg
gacttcgacatcgaaaaggtcccgctcgatgacaagccgaccttcgacatcctgaaccgc
ggcgagacgatgggtgtgttccagctggaatccggcggcatggtcgagacctgccgcaag
taccagatcgagaagatcgacgacatcatcgaccttctcgccctctaccgcccgggtgcc
atgcagttcatcgaccagatgatcgaggtcaagaagggccgcaagaagcccttctacgag
caccccctgctcgagcaggtctgcggcaatacctacggggtcatgatctatcaggagcag
gtgcagaatgcggccaaggtcctggccggctacacgctcggcggtgccgaccttctgcgc
cgcgcgatgggcaagaaggatccgaagaagatggccgaggagcgctcgaaattcgttgag
ggcgcgggccgggtgaacaacatcaacgagaagctcgccaacgccatcttcgagaagatc
gagatgttcgccggctacggcttcaacaaatcccactccgcctgctacggccacatctcc
tactggaccgcctacctgaaggcgaatttcccggtcgagttcatggccgccctgctctcg
aacgaaatcaacaacaccgacaagatcggcgtcttcgtcgcggagtgccaccgcatggcc
atcgagatcctgccgccggatctcaaccgctcgaagctccgtttcgcgccggagcaattg
ccgtccggggtcttcgcgatccgctacggactcgccgcgatcaagaacgtcggcgagggc
gcgatggcgcaggcaatcgccgaccgcgaagccaaggggcacttcgcctcgctcgaggaa
ttttccaaccgcctcgactcgaagtcggtcaacaagcgcatcctcgaaaacctggtgaag
gccggtgccctcgactggaccggcgatacccgcgcccagatgttcaaccgcctggagcag
gtggtcgccagtgcttcctccgcccagaaggaccgcgcctccggccaggtctcgctcttc
gataccatggacttcgccgcctccgccccggcaagtacggcaaccgccgtagccgtggaa
gagtggaccaaggacgaacgccttgcccaggagaaggaactgctcggcttctacgttacc
ggccacccgctcgataaattccgcggcgtgctcgattccgacaagtacatgaggctgggc
ctgctcgatgagatcgacgtgaccaatccccgcgaccgcttccccttcgccggcatgatc
cgcaccctggaagcaaagatcaccaagagcggcaagcccttcggtgtgatggttgtggag
gacttcaccggctccgcggaagtcgtcatgtggggcgagtccttcgtccccgcccgcgat
gccgggacccttgcccccggcaaggtgatcaaattcaaagccgcgatccaagtcgacgac
cgcaccgagtcccgccgcctcaccggctacgagttgaacgagctcaagccccgcggcagc
tccgcgaccaagggggccctcgagctcaccctctggaccgcccgccattccgagcgcgac
ctcgccgagatccgtaacgccctcgccgccaatcccggcaaggtgcccgtcttcctccat
ttccagaacagcgccggccgccgcgccacgttggagttgagcgagagttaccgggtcaag
cggaccgacctcttggagaaggccttgggacgttggatggactag
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