KEGG   Luteolibacter sp. Populi: ABWK72_19960
Entry
ABWK72_19960      CDS       T10555                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lup  Luteolibacter sp. Populi
Brite
KEGG Orthology (KO) [BR:lup00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lup02044]
    ABWK72_19960 (tssC)
Secretion system [BR:lup02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ABWK72_19960 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: XDA92411
LinkDB
Position
complement(4917454..4918938)
AA seq 494 aa
MSDTETSKQSAAGEFETVSALDAAIEGLSLPTKGAEDTTKNAARSLAEWILKDTVTYDGS
ILAFIEGVIAQIDQLLSKQLNAIMHQADFLKMEGSWRGLEHLVFNTETDDQLRIEIFNIS
KSEVRQVLKEYKGDKWDRSPLFRKVYEEEFGMPGGKPYGVMIGDYAFDHSPVDVDILRGV
GQIAAAAHCPFITSAAPSLLGLSSWQDLSKPPKIDKVLSKTNPEYAAWRSLRSSEDSRYL
GLTLPRFLARAPYDPQKNPIDDFEFVEELGGTDHDSYVWSNAAYAFGANVTRAFKLYGWC
TYIRGHDSGGKVENLPVHTFPSDDGSIDYKCPTEIAITDRREHELAKVGLMPLSHYKNED
FAVFMGAQSLQEPQKYYEDDATANAALSARMTYLFACCRFAHYLKVMVRDKIGAFMERNE
MEDWLNKWINNYQCDSSSSWELKAKKPLAAAKVTVRANEADPGYYDADFFLRPHIQLEGL
TAALHLVSRLPANK
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgagcgacaccgaaacttccaaacagtcagccgccggcgaattcgaaaccgtcagtgcg
ctggacgccgcgatcgaggggctttccctcccgacgaaaggcgccgaggacaccaccaag
aatgccgcgcgctcgctggccgagtggatcctcaaggacaccgtcacctacgacggcagc
atcctcgcattcatcgagggcgtgatcgcgcagatcgaccaattgctgtcgaagcagctc
aatgcgatcatgcaccaggcggacttcctgaagatggaaggaagctggcgcggactggag
catctggtcttcaacacggagacggatgaccagctgcggatcgaaattttcaacatcagc
aagagcgaggtccgccaggtgctcaaggagtacaagggcgacaagtgggatcgcagcccg
ctcttccgcaaggtctatgaagaagaattcggcatgccgggcgggaagccctacggcgtg
atgatcggggattacgccttcgaccactcgccggtggatgtggacatcctgcgcggagtc
ggccagatcgcggcggcggcgcattgccctttcatcacctctgcggcaccgagcttgctg
gggttgagctcgtggcaggatctgtcgaagccgccgaagatcgacaaggtgctttccaag
acgaatccggagtatgccgcgtggcgctcgctgcggtcatcggaagattcccgctatctg
gggctgacgctgccgcgcttcctggcgcgcgcgccttacgatccgcagaagaatccgatc
gacgattttgaattcgtggaggagctcggcggcacggatcacgacagttatgtgtggtcg
aatgcggcgtatgccttcggggcgaacgtgacgcgggccttcaagctctacggctggtgc
acctacatccgcggccacgacagcggcggcaaggtggagaacctgccggtgcacaccttc
ccgtccgacgacggctcgatcgactacaagtgcccgacggagatcgcgatcacggaccgc
cgcgagcacgagctggcgaaggtcgggctgatgccgctctcgcactacaagaacgaggat
ttcgcggtcttcatgggcgcgcaatcgctgcaggagccgcagaaatactacgaggacgac
gcgaccgcgaatgccgctctatccgcccggatgacgtacctcttcgcctgctgccgcttc
gcccactacctgaaggtgatggtccgcgacaagatcggtgccttcatggagcgcaacgaa
atggaggactggctgaacaagtggatcaacaactaccagtgcgattccagttcctcttgg
gagctcaaggcgaagaagccgctcgccgccgcgaaggtgacggtgcgggcgaacgaggct
gatccgggctactatgatgcggacttcttcctgcgcccgcacatccagctcgaaggcctg
acagccgcgctccatctcgtctcaaggctgcccgccaacaaatag

DBGET integrated database retrieval system