Luteolibacter sp. Populi: ABWK72_20150
Help
Entry
ABWK72_20150 CDS
T10555
Name
(GenBank) type VI secretion protein IcmF/TssM N-terminal domain-containing protein
Organism
lup Luteolibacter sp. Populi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
Motif
Other DBs
NCBI-ProteinID:
XDA92449
LinkDB
All DBs
Position
4964539..4968174
Genome browser
AA seq
1211 aa
AA seq
DB search
MNRPSTAPRSSEDTSFVIRKFGIRHSSGLGLPGLLLLIVCVLTLASLGAMAYLQFKIWGL
LIFALIVAGLIIIGLLFYLFFRWLSMRKAAKFEQQLTASTMAGGSSTDPAEISRREELRD
KFKSGLKTLTDSGKNLTRFPLYVMVGEPGAGKTEAIRHSSIRFPQGINDLLQGVGGTYNM
DWWFTNDAIILDTAGALLLEQSNKAQFEEFLDQLKHYRPDYPITGLVLAIPADSLLIDDP
RHLEEKAGRIVEQFAVLQESLDLRYPVYVMVTKCDLITGFREFFDAPGNEAFEPQMLGWS
NPDPLDHAFEPSRTASVLNPLADRLQRVRDRLLGANWPSGPELRRLDFLDSVYAFPGEFR
RLFSPLGKYLEILFHSDRWKNKRPPFFRGIYFTSSLRQGAVLDKELASALNLPLSRLPEV
RGYQTEKSMFLRDFFLEKLFRENGLVTRLTNIGRGLRNRLMRFYLITSSVLLLLLLTGWY
ASRQLDKRLAAERNLWNLANQTWDNGTFLPLFDHGGPEGAWRYAGDQPVMNSEFTRVAYH
QKLSSEVEKGLGWGRYFAPLPAYRQLSHDRERARIVILEGSIIRPLLQAARENLLKTPRT
IGTTDQVAATVSLVELEACINENRAIASQEDVARIFGPIYRVAAPVTFGSEGKQAEASAA
IEKELNRLIAEAWSEVDSGDLDRMRWMAEGPPYRALSRGMNLFTKHKITIDNQQAENDGQ
SQRREKLASDLMVYEDELWLGLQAGDDFKKLEQSLAGMEDAGKALDEITGPVASSMRRVD
YAKFDSRLRDLLPKVPSLLATELGRFLEVVGKADPVWASLEGKQRSFDPESPKAILWAAY
LDAADDGTAHYRKRLDALLQHYPLRAPDHELVRQFQAPQPGQLQVMLDALAKRVDDRSKV
IPGYPEAPKLPEEKPDAAADPAKVRARAEAARKLQLRLNELGERGKRLTLDFDLGTKEWL
HSKYLDGPFAEALKAQQGLIFRAPFGRSSPALPPGPEFSRAAQIISLLAGDFASCDNLFA
GSRHYKLKESLSPLRLDLLNPKPNRRARFDVIAKAKAAVADDGFGVVSVEAQIGAFLIPA
VVKQDRDWQLMPPFVKQKETIIAQGIRNVKVGKPPGELQAKPAGQRVPIGPLSLADPIKV
TVEWEAAQGMPSSSVGEGGAWGTLDFIVGRSGNNASAIREIPVLTAFGQQLTLLFTFPSP
YPVSRPSSFDN
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcccatccacggccccccgatcttccgaagacacttcattcgtcattcggaaa
ttcggaattcgtcattcctccggtctgggcctccccggcctgctcctgctgatcgtctgc
gtcctcaccctcgcgtccttgggcgcaatggcctacctccagttcaagatctggggtctt
ctcatcttcgctctcatcgtcgcaggcctgatcatcatcggtctccttttctacctgttc
ttccgctggctctcgatgcgcaaggcggcgaagttcgagcagcagctcaccgcctccacc
atggccggcggttcctccactgatcccgccgaaatctcccgccgcgaggagctgcgggac
aagttcaagtccggcctcaagaccctcaccgatagcggcaagaacctgacccgcttcccg
ctctacgtgatggtcggcgagccgggtgccggcaagaccgaggcgatccgccacagctcg
atccgcttcccgcagggcatcaacgacctgctgcaaggcgtcggtggcacctacaacatg
gattggtggttcacgaacgacgccatcatcctcgacaccgccggcgcgctgctgctcgaa
caatccaacaaggcgcagttcgaggaattcctcgaccagctcaagcactaccggcccgac
tatccgatcaccggtctcgttctcgcgatccccgcggacagcctgctgatcgatgacccg
cgccacctcgaagaaaaggccggtcgcatcgtcgagcagttcgcggtgctccaggaatcg
ctcgacctccgctacccggtctacgtcatggtcaccaagtgcgacctgatcaccggcttc
cgcgagttcttcgatgcgccgggcaatgaagccttcgagccgcagatgctcggctggtcg
aatcccgatccgctcgatcacgccttcgagccctcccgcaccgcctccgttcttaatccg
ctcgccgatcgtctgcagcgggttcgcgaccgtctgttaggagccaattggccgagcggc
cccgagctccgccgcctcgacttcctcgattccgtctatgccttcccgggcgagttccgt
cgcctcttcagcccgctcggaaagtatctcgaaatcctcttccactccgatcgctggaag
aacaagcgcccgcctttcttccgcggcatctacttcaccagctccctgcgccagggtgcg
gtgctcgacaaggaactcgcctccgccctgaacctgccgctcagccgcctgccggaagtc
cgcggttaccagacggagaagtcgatgttcctgcgcgatttcttcctcgagaagctcttc
cgcgagaacggcctcgtcacccgcctcaccaatatcggccgcggcctgcgcaaccggctg
atgcgcttctatctgatcacctcatcggtgctcttgctgcttcttctaacaggctggtat
gccagccgccagctcgacaagcgtctcgccgccgagcgcaatctctggaacctcgccaac
cagacttgggacaatggcaccttcctgccgctcttcgaccatggcggcccggagggtgcc
tggcgctacgccggggaccagccggtgatgaactccgagttcacccgcgtcgcctaccac
cagaagctctcctcggaagtcgagaagggcctcggctggggccgctacttcgccccgctg
cccgcctaccgccagctcagccacgaccgcgagcgggcgcgcatcgtgatcctcgaaggc
agcatcatccgccccctgcttcaggccgcgcgcgagaatctgctcaagaccccgcgcacc
atcggcaccaccgaccaggtggcggccacggtctccttggtcgagctcgaggcctgcatc
aacgagaaccgcgcgatcgcctcccaggaagacgtcgcccggatcttcggcccgatctac
cgcgtcgccgcgccggtgaccttcggctcggaaggcaagcaggcggaagcctccgccgcg
atcgagaaggaactcaaccgcctcatcgccgaggcatggtccgaggtcgactccggtgat
ctcgaccgcatgcgctggatggcggaggggccgccctaccgcgcgctctcgcggggcatg
aacctcttcaccaagcacaagatcaccatcgacaaccagcaggctgaaaacgatggccag
agccagcgccgcgagaagctcgccagcgacctgatggtctatgaggacgagctgtggctg
ggcctgcaggccggggacgacttcaagaagctcgagcaatcccttgccgggatggaagat
gccggcaaggcgctcgacgagatcaccggccccgtcgccagttcgatgcgccgggttgat
tacgcgaagttcgactcacgcctgcgcgacctgctcccgaaggttccttccttgctcgcc
acggaattgggccgcttcctggaggtcgtcggaaaagccgaccccgtctgggcatccctc
gaaggcaagcagcgcagcttcgatcccgaatcccccaaggccatcctctgggccgcttat
ctcgatgccgccgatgatggcaccgcgcactaccgcaagcgcctcgacgccctgctccag
cactacccgctgcgcgctcccgaccacgaactcgtgcgccagttccaagccccgcaaccg
ggccagcttcaggtgatgctcgatgccttggccaagcgcgtcgacgatcgcagcaaagtc
atccccggctatcccgaagctcccaagctgccggaagaaaagcccgatgccgcggcggat
ccggccaaggtccgcgcccgcgccgaggccgccagaaagctccagctccggctcaacgaa
cttggcgagcgcggcaagcgcctgaccctcgatttcgatctcggaaccaaggagtggctc
cactcgaagtatctcgacggccccttcgccgaagcgctcaaggcccagcagggcctcatc
ttccgagcacccttcgggagaagttcacccgccctgccgcccggccccgaattcagccgc
gccgcccagatcatcagcctgctggcaggagatttcgcatcgtgcgacaatctctttgcg
ggtagccgccactacaagctgaaggaatcactcagccccctgagattggaccttctcaat
cccaagccgaaccgccgcgcgcgtttcgacgtcatcgccaaggcgaaggccgcggtcgcc
gatgacggctttggtgtcgtctccgtcgaggcgcagatcggagccttcctgatcccggcc
gtggtcaagcaggatcgcgattggcaattaatgccgcccttcgtgaagcagaaggaaacc
atcatcgcccaaggcatccgcaatgtgaaggtcggcaaaccacccggtgaactccaagcc
aagcccgccggccagcgcgtgcccatcggcccgctctcccttgccgatccgatcaaggtc
acggtcgagtgggaagccgcgcaaggcatgccatcgtcctcggtcggcgaaggcggcgcc
tggggcaccctcgacttcatcgtcggccgctccggtaacaacgcctcggccatccgtgag
atcccggtgctcaccgccttcggccagcagctcacgctcctcttcaccttcccgagtccc
tatcccgtttcccgcccgtcgagcttcgacaattga
DBGET
integrated database retrieval system
