Luteolibacter sp. Populi: ABWK72_20160
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Entry
ABWK72_20160 CDS
T10555
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
lup Luteolibacter sp. Populi
Pathway
lup02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lup00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABWK72_20160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lup03021
]
ABWK72_20160
Transcription machinery [BR:
lup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABWK72_20160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
DUF5788
Motif
Other DBs
NCBI-ProteinID:
XDA92451
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All DBs
Position
4969262..4970128
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AA seq
288 aa
AA seq
DB search
MSYDSDSSLKVYLREISRTPLLTPEEEVKLAKKIKKGDNDARTHMIKANLRLVVKIAQDY
SGYGLPISDLISEGNIGLMKAVERFDPQKGGKLSTYAAWWIKQSIKRALANQSKTIRLPV
HMVDKIAKMRRISTLLGEALGREPTDEELADEVGLPRRKLAMLKQASQRPTSLDAPINEG
EATEYGEIIGDDRAEDPLESLSERNLQGELGGLLDVLDKRERRIIDERFGLTGKTPLTLE
EVGREFGVTRERIRQLQNVALTKMRKALRRKDKPLPARASMSDGLPAT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgactccgactccagtttgaaggtctaccttagggagatctcgcggaccccg
cttctcacccctgaagaagaggtgaagctcgccaaaaagatcaagaagggcgacaacgac
gctcgcactcacatgatcaaggcgaacctccgcctcgtcgtgaagatcgcgcaggattac
tccggctacgggcttccgatttccgacctgatttccgaaggcaatatcggcctgatgaag
gcggtggaacgtttcgacccgcagaagggtggcaagctttcgacctacgccgcgtggtgg
atcaagcagtcgatcaagcgcgccctggccaaccagagcaagacgatccgcctgcccgtc
cacatggtggacaagatcgccaagatgcgccggatctcgaccttgcttggcgaagcgctg
ggccgcgagcccaccgacgaggaactggccgacgaagtcggcctgccccgccgcaagctc
gccatgctcaagcaggcctcgcaacgtccgacctcgctcgacgcgccgatcaatgaaggc
gaagcgaccgaatacggtgaaatcatcggcgacgaccgcgccgaggatccgctggaaagc
ttgtccgaaaggaacctgcaaggggagctgggcggcctgctcgacgtgctcgacaagcgc
gagcgccggatcatcgacgaacgcttcggcctcaccggcaagacgccgttgacgctcgaa
gaggtcggccgcgaattcggtgtcacccgcgaacgcatccgccagctccagaacgtggcg
ctgaccaagatgcgcaaggcgctgcgccgcaaggacaagccgctgccggccagggcttcg
atgtccgacgggctgccggccacctga
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