Luteimonas yindakuii: E5843_00650
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Entry
E5843_00650 CDS
T05957
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lus
Luteimonas yindakuii
Pathway
lus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5843_00650 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lus03400
]
E5843_00650 (recD)
Enzymes [BR:
lus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E5843_00650 (recD)
DNA repair and recombination proteins [BR:
lus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5843_00650 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
RecD_N
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
UvrD_C
Mg_chelatase
SLFN-g3_helicase
DEAD
nSTAND3
T2SSE
AAA_16
Herpes_Helicase
AAA_24
AAA_29
FtsK_SpoIIIE
NTPase_1
ATPase
AAA_28
Rad17
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QCO68661
LinkDB
All DBs
Position
60429..62573
Genome browser
AA seq
714 aa
AA seq
DB search
MTTAPAAAPSQAARAAGLLQQLTRAGALRTLDHALAQSLRRLDPDTPDTVLAAAALASLA
VASGHAGFDPSEPQRLVDAAVGWPAPDAWRDALQTSRWVATPAAGDAASAADAPLVYEHG
LVYLRRYREYERRLADGLRRIGRASPAGTADRSDRRGIAATPGVPAGLAPLFACLFPAVP
SPAEREKVPPTGADEGAPIDHQSRAAAAALGHNLLLVTGGPGTGKTTTITRMLVLLVAQA
QEAGKATPRIALAAPTGRAAERMAESVRTAVQALPALGVEPDLCAQLPTTGTTLHRLLGT
IPDSPRFRHHADNPLPFDVVVVDEASMIDLPLMAKLVEAVPDGARLVLLGDPDQLPSVEA
GDVLAGILSAARSATDDAAPDPAAAALVAISAAAAPVGPSAAAAHADTSPARGRGRAEGA
GEGALPSAATAPNFPARHIHLTRGYRQSASLDLAPLAAAVREGDSATALSLLRSGELSGV
HLHEGDTDPLQSHRDHLLEHWTALADGNDPANALARAGRLRILTAVREGPQGARGLNARI
EDLLAGTRRGAGPASTASRYFHGRLLLVTENSYRHRLFNGDIGICLRDDGGTLMAWFPGD
DPHNPRPFHPAALPAHDSAFAMTVHKAQGSEFDAVWLVLPERFNRVLSRELVYTGMTRAR
SVLHVAGSADVITEALARHAGRWSGLGWRLGANADASVHDTPATVDGTMQGSLF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgcccccgccgcggcgccatcgcaggcagcgcgggccgccggcctgctgcag
caactgaccagagccggggccctgcgcacgctcgaccatgccctggcgcagagcctgcgc
cggctcgatccggacacgcccgataccgtgcttgccgccgccgccctcgcctcgctggcc
gtcgcctccggccatgccggcttcgatcccagcgaaccgcagcgcctggtcgacgcagcg
gtcggctggcccgcgcccgacgcctggcgcgatgcgctgcagacctcgcgctgggtcgcg
acgccggccgcgggcgacgccgcgtccgccgccgacgccccgctggtgtacgaacacggc
ctggtctatctgcgccgctaccgcgaatacgaacgccgcctcgccgatggcctgcgccgt
atcggccgcgcatcgcccgcaggtacggcggaccgctccgatcgccgtggtatcgcggcg
acccccggggttcccgccgggctggcaccgctgttcgcctgcctgttccctgccgtccct
tctcccgccgagcgggagaaggtgcccccgacgggggcggatgagggcgctcccatcgac
caccagtcccgcgccgccgccgccgcgctcggccacaacctgctgctggtcaccggcggc
cccggcaccggcaagaccaccaccatcacccgcatgctggtgctgctggtcgcgcaggcg
caggaagccggcaaggcgacgccgcgcatcgctctcgcagcgcccaccggacgcgcggcc
gaacgcatggccgaaagcgtgcgcactgccgtacaggcgctgcccgcgctcggcgtggaa
cctgacctgtgcgcgcaactgcccaccaccggcaccacgctgcaccgcctgctcggcacc
atcccggactcgccgcgcttccgccaccacgccgacaacccgttgccgttcgacgtggtg
gtggtggacgaagcctcgatgatcgacctgccgctgatggccaaactggtcgaggccgtg
cccgacggtgcgcgcctggtgttgctgggcgatcccgaccagctgccctcggtggaagca
ggcgacgtgctcgccggcatcctctccgccgcgcgcagtgcgaccgatgacgctgccccc
gacccggctgccgctgcacttgttgccatctccgccgccgctgcgccggtcggcccctct
gccgccgctgcacatgccgacacctctcccgcccgcgggagaggtcgcgccgaaggcgcg
ggtgagggcgctctgccatcagccgccacggcacccaacttccccgctcgccatatccac
ctcacccgtggctaccgccagagcgcctccctcgacctcgccccgctcgccgccgccgtg
cgcgaaggcgacagcgccaccgcgctgtcactgctgcgcagcggcgagctgtccggcgtg
catctccacgaaggcgacaccgatccgctgcagtcgcaccgcgaccatctgctcgaacac
tggaccgcgcttgccgacggcaacgaccccgccaacgcgctcgcccgcgccggccgactg
cgcatccttaccgccgtacgcgaaggcccgcagggcgcgcgcgggctcaacgcccgtatc
gaggacctgctggccggcacccgccgcggcgctggccctgcatccaccgccagccgctac
ttccatggccgcctgctgctggtcaccgagaacagctaccggcaccggctgttcaacggc
gacatcggcatctgtctgcgcgatgacggcggcacgttgatggcgtggttccccggcgac
gatccgcacaacccgcggccgttccatccggcggcgctgcccgcgcacgacagcgccttc
gcgatgaccgtgcacaaggcgcagggcagcgagttcgacgcggtgtggctggtgctgccg
gaacgcttcaaccgcgtgctgtcgcgggagctggtctacacggggatgacgcgggcgcgc
agcgtgttgcacgtggccggcagtgccgacgtcatcaccgaagcactggcgcggcatgcc
gggcggtggtcggggcttggctggcgactgggggcgaacgcagatgcgtccgtgcatgac
acgcccgccactgtcgacggcaccatgcagggcagcctgttctga
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