Luteimonas yindakuii: E5843_00880
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Entry
E5843_00880 CDS
T05957
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lus
Luteimonas yindakuii
Brite
KEGG Orthology (KO) [BR:
lus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lus03032
]
E5843_00880
03400 DNA repair and recombination proteins [BR:
lus03400
]
E5843_00880
Enzymes [BR:
lus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E5843_00880
DNA replication proteins [BR:
lus03032
]
Prokaryotic type
DNA Topoisomerases
E5843_00880
DNA repair and recombination proteins [BR:
lus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E5843_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QCO66711
LinkDB
All DBs
Position
102137..103291
Genome browser
AA seq
384 aa
AA seq
DB search
MSPSSAAAAPPTADPVRDARQAGLLYVSDTEPGISRRRTGTGFSYRLPDGSVLRDRDELA
RIRALAIPPAYTEVWICSHPRGHLQATGRDARRRKQYRYHPQWAEARGLGKFDRVIAFGR
ALPRLRRRLRRDLRQPGFPRDKVLAVVVSLMAETLVRVGNACYASSNRSYGLTTLRNRHI
DFLRGGRARLRFRGKGGLDHDLEIDDAQLVKLVRACQELPGQALFQYHDDAGTLQPVDSS
DVNAYLREATGEQFTAKDFRTWGATLEAFRILATTPLPPPSRTGAPSERALAQAKNAVVA
EVASVLCNTPSVCRKAYIDPRVFAGWEDGSLARAAATARGARQWEQAALKFLAGCDRARA
AAARRAPRAPAAARRARRTTTARN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtccatcttccgctgcggccgcaccgccgaccgccgatcccgtgcgcgacgcccgc
caggcgggcctgctgtacgtcagcgacaccgagcccggcatcagccgtcggcgcaccggc
acgggcttttcctaccgcctgcccgatggcagcgtgctgcgcgaccgcgacgaactggcg
cgcatccgcgcgctcgcgatcccgccggcctatacagaggtctggatctgcagccatccg
cgcggccacctgcaggcgaccggtcgcgacgcgcgccggcgcaagcagtaccgctaccac
ccgcagtgggcggaggcgcgcgggctcggcaaattcgaccgcgtgatcgccttcggccgc
gcactgccacggctgcgccggcggctgcggcgcgacctgcgccagcccggcttcccgcgc
gacaaggtgctggcggtggtcgtgtcgctgatggcggaaacgctggtgcgggtcggcaac
gcctgttacgccagcagcaaccgctcgtacgggctgaccacgctgcgcaaccggcatatc
gatttcctgcgcggcggccgcgcgcgcctgcgcttccgcggcaagggcgggctcgatcac
gacctcgagatcgacgacgcccagctggtgaagctggtgcgcgcctgccaggaactgccc
gggcaggcgctgttccagtaccacgacgacgccggcacgctgcagccggttgattccagc
gacgtcaacgcctatctgcgcgaagccaccggcgagcagttcaccgccaaggacttccgc
acctggggcgccacgctggaagccttccgcatcctcgccaccaccccgttgccgccgccg
tcgcgcaccggtgcgcccagcgaacgtgcgctggcgcaggcgaagaacgcggtggtcgcc
gaggtggcatcggtgctgtgcaacacgccctcggtatgtcgcaaggcctatatcgacccg
cgcgtgttcgccggctgggaggacggcagcctggcccgcgccgcggccaccgcacgcggg
gcgcgccagtgggaacaggcggcgctgaagttccttgccggctgcgatcgggcacgtgcc
gccgcggccaggcgggcgccgagggcgccggcagcggcgcgtcgcgcacgacgcacgaca
acagcgcgcaattga
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