Luteimonas yindakuii: E5843_08275
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Entry
E5843_08275 CDS
T05957
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lus
Luteimonas yindakuii
Pathway
lus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E5843_08275 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lus03400
]
E5843_08275 (sbcB)
Enzymes [BR:
lus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
E5843_08275 (sbcB)
DNA repair and recombination proteins [BR:
lus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E5843_08275 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5843_08275 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5843_08275 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCO67767
LinkDB
All DBs
Position
1693573..1695015
Genome browser
AA seq
480 aa
AA seq
DB search
MSSNFLFYDLETFGSDPRRTRIAQFAAIRTNESLEEIEAPIDILVRPADDLLPSPGATLV
TGIEPQRALRDGIREAEAFALIQEAMAQPRTCSVGYNSLRFDDEFIRCGLYRNFHDPYER
EWRGGNSRWDLLDVMRLAHALRPGGITWPRREDGATSFRLEHLATANDVRVGDAHEAVSD
VRALIGMARRLRQSQPRLWDYALRLRDKRHAASLLDTVAMQPVLHVSQRYPASRMCAAAV
LPLTRHPRIDGRVIVFDLEGEPERLLDLEPEEIADRLYTPARDLPEGETRIPLKEVHLNR
CPSLVAWRHLTHADLERLCIDDALVQARAERLRGVGPALAEKVRRVYAVEAERALSDADG
AIYDGFLGDGDRKRCAEVRATPPDQLGTRSFGFQDPRLDELLFRYRARNWPELLGTDERV
RWDAYRRQRLAEGSDLSENSLPGFFGEIAQLRVAHAGNGSVQVLLDRLESWGRGIAASLQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacttcctcttctacgatctcgaaaccttcggcagcgacccccgccgtacg
cggatcgcccagttcgcggcgatccgcaccaacgagtcgctggaggagatcgaagcgccg
atcgacatcctggtgcgccccgccgacgacctgctgccgtcgcccggcgcgaccctggtc
accggcatcgagccacaacgcgccctgcgcgacggcatccgcgaggccgaggccttcgcc
ctgatccaggaagcaatggcgcagccgcgcacctgcagcgtcggctacaactcgctgcgt
ttcgacgacgaatttatccgctgtgggctgtaccgcaacttccacgatccctacgaacgc
gagtggcgcggcggcaactcgcgctgggacctgctggacgtgatgcggctggcgcacgcg
ctgcggcccggcggcatcacctggccgcgccgcgaggacggcgccacctccttccgcctc
gaacacctggccacggccaacgacgtgcgcgtcggcgatgcacacgaagcggtgtccgac
gtgcgcgccctgatcggcatggcgcggcggctgcgccagtcgcagccacggctgtgggac
tacgcactgcgcctgcgcgacaagcgccatgcggcgtcgctgctcgacaccgtggcgatg
caaccggtgctgcacgtctcccagcgctatccggcgtcgcggatgtgcgccgccgcggtg
ctgccgctgacgcgccatccgcgcatcgacggtcgcgtgatcgtcttcgacctcgaaggc
gaacccgaacgcctgctcgaccttgagcccgaggagatcgccgaccgcctgtacacgccg
gcgcgtgacctgccggagggcgagacccgcatcccgctgaaggaggtccacctcaaccgt
tgtccgtcgctggtggcctggcgccacctcacccatgccgacctggagcgcctttgcatc
gacgatgcgctggtgcaggcgcgcgcggaacgcctgcgcggtgtcgggccggcgctggcg
gagaaggtccgacgtgtctacgccgtagaagccgagcgcgcgctttccgatgccgacggc
gcgatctacgacggcttcctcggcgacggcgaccgcaagcgctgcgccgaggtgcgcgca
accccgccggaccagctcggcacgcgtagcttcggcttccaggacccgcgcctggacgag
ctgctgttccgctatcgcgcacgcaactggccggagcttctgggcacggacgagcgcgtg
cgttgggatgcctaccgccgccagcgcctggccgagggcagcgacctgtccgagaactcg
ctgccgggtttcttcggcgagatcgcccagttgcgtgtcgcccacgccggcaatggcagc
gtccaggtgctgctggaccggctcgagagctggggccgggggatcgcggcgtcgctccaa
tag
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integrated database retrieval system
