Luteimonas yindakuii: E5843_12435
Help
Entry
E5843_12435 CDS
T05957
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lus
Luteimonas yindakuii
Pathway
lus02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E5843_12435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lus02022
]
E5843_12435
02035 Bacterial motility proteins [BR:
lus02035
]
E5843_12435
Two-component system [BR:
lus02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
E5843_12435
Bacterial motility proteins [BR:
lus02035
]
Pilus system
Twitching motility proteins
E5843_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_50
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
QCO68373
LinkDB
All DBs
Position
2563124..2564569
Genome browser
AA seq
481 aa
AA seq
DB search
MTTTSEQRSVLIVDDEHDIRELLVLTLGRMGLRTDTAPTLTAARELLGSGSYELCLTDMR
LPDGSGLELVAEITTRFPRTPVAVITAYGNVEAAVEALKAGAFDFVSKPVDIHMLRGLVR
QALDLNTRPAPSASEEPAGRLFGESDAMVDLRRTVAKVARSQAPVHISGESGTGKELVAR
TIHGQSARAAGPFVPVNCGAIPNELMESEFFGHRKGSFTGAHADKPGLFQTADGGTLFLD
EVAELPLSMQVKLLRAIQEKTIRPVGASIEVPVDVRILSATHKDLAQLVDLGSFRHDLYY
RINVIGLHVPPLRERTGDLKLLSTGILQRLAQAMRRPTPVLAPAALAALEEYPFPGNVRE
LENILERALALAEGDLIQPDDLHLPRGQRPGAHLALGAANRGDTAPGQSPGGMHAASTPD
PRTLSPYDTASTALPSYIEEIERAAIQQALQENRYNKTKTAAALGITFRALRYKLKKLGI
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgaccagcgaacaacgctccgtactgatcgtcgacgacgaacacgacatccgc
gagctgctggtgctgacgctggggcggatgggcctgcgcaccgataccgcgcccaccctc
accgccgcccgcgaactgctgggtagcggcagctacgagctgtgcctgacagacatgcgc
ctgccggacggctccggcctcgagctggtggccgagatcaccacccgcttcccgcgcacc
ccggtcgcggtgatcactgcctacggcaacgtcgaggccgcggtggaagcgctgaaggcg
ggcgcgttcgatttcgtcagcaagccggtcgacatccacatgctgcgcgggctggtgcgc
caggcgctggacctcaacacgcgccccgccccttcggccagcgaggaacccgccgggcgc
ctgttcggcgaatccgacgccatggtcgacctgcgccgcacggtggccaaggtcgcgcgc
agccaggcgccggtgcatatcagtggcgaatccggcaccggcaaggagctggttgcccgc
accatccacgggcagagcgcacgggcggcgggcccgttcgtgccggtcaactgcggcgcc
atccccaacgagctgatggaaagcgaattcttcggccacaggaagggcagcttcaccggc
gcccacgcagacaagcccggcctgttccagaccgccgacggcggcaccctgttcctcgac
gaggtggccgagctgccactgtcgatgcaggtcaagctgctgcgcgcgatccaggaaaag
accatccgcccggtcggcgcctcgatcgaggtgccggtggacgtgcgcatcctttcggcc
acccacaaggacctcgcccagctggtcgacctcggcagcttccgccacgacctctactac
cgcatcaatgtcatcggcctgcacgtgccgccgctgcgcgaacgcaccggcgacctcaag
ctgttgtccaccggcatcctgcaacgcctcgcccaggccatgcgccgccccacccctgta
ctggcccccgccgcgctcgcggcgctggaggagtaccccttccccggcaacgtgcgcgaa
ctggagaacatcctcgaacgcgccctggcactggccgagggcgacctcatccagcccgac
gacctgcacctgccccgcggccagcgtcccggcgcccacctcgccctcggcgccgcgaac
cgcggtgacaccgcacccggccagtcacccggcggcatgcacgcggcatccacgcccgac
ccgcgcaccctcagcccctacgacaccgcttccaccgcgctgccctcgtacatcgaggaa
atcgaacgcgctgccatccagcaggccctgcaggaaaaccgctacaacaagaccaagacc
gcggcggcgctgggcatcaccttccgggcgctgcggtacaagctgaagaaattggggatt
gattga
DBGET
integrated database retrieval system
