Luteimonas yindakuii: E5843_13685
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Entry
E5843_13685 CDS
T05957
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lus
Luteimonas yindakuii
Pathway
lus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5843_13685 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lus03019
]
E5843_13685 (rhlB)
Enzymes [BR:
lus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E5843_13685 (rhlB)
Messenger RNA biogenesis [BR:
lus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5843_13685 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RhlB
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QCO68559
LinkDB
All DBs
Position
complement(2834782..2836641)
Genome browser
AA seq
619 aa
AA seq
DB search
MSDKPLTDITFSEFDLHPQLLAGLEAAGFLRCTPIQALTLPLALNGRDVAGQAQTGTGKT
LAFLVAVIDRLLKRPALADRKPEDPRALILAPTRELAIQIHKDAMKLDLGLKFALVYGGV
DYDKQRQQLQDGADVIIATPGRLIDYVKQHKVVSLHACEMCVLDEADRMFDLGFIKDIRF
LLRRMPIRTERQTLLFSATLSHRVLELAYEHMNEPEKIVVESEFITAAKVRQKVYYPSDE
EKIPLLLGLLSRSEGARTMVFVNTKAFVERVARSLEKAGYRVGVLSGDVPQKKRESLLKK
FQAGQLEILVATDVAARGLHIDGVSHVYNYDLPFDAEDYVHRIGRTARLGAEGDAISFAC
ERYAMSLPDIEAFIEQKLPLEPVTAELLTALPRKPREGVELQAEEGESIGEIFREAREQR
AADDARRGGPRKGGTGGAGAGRRSNGGRGSSGAAGSGERRGPRSSDDAHVAASPDAAPAA
VTNGGAAAAVVTAEGAPANAGDAAAPARKRRRRRGPRKDGDAAGASAQAAAPATGEAGTA
AARGPRPPRQGGTEGGATRAPRAPRESAASSATPRAPRDSAAAPAAARPAPASTQPSPSL
LSRIGRGLKRLVGGSTDAR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcctcttaccgacatcaccttttcggaattcgacctgcatccgcagttg
ctggccggcctcgaagccgccggattcctccgctgcaccccgatccaggcattgaccctg
ccgctcgcgctcaatggacgcgacgtggctggccaggcgcagacgggcaccggcaagacc
ctcgccttcctggtcgcggtgatcgaccgcctgctcaagcgcccggcgctggccgaccgc
aagcccgaggatccgcgcgcgctgatcctggcgccgacccgcgagctcgccatccagatc
cacaaggatgcgatgaagctcgacctcgggctgaagttcgccctggtctacggcggcgtc
gactatgacaagcagcgccagcagctccaggacggcgccgacgtcatcatcgccacgccc
ggccgcctgatcgactacgtcaagcagcacaaggtcgtgtccctgcatgcctgcgagatg
tgcgtgctcgacgaggccgaccgcatgttcgacctcggcttcatcaaggacatccgcttc
ctgctgcggcgcatgccgatccgcaccgagcggcagacgctgctgttctcggcgacgctg
tcgcaccgcgtgctcgagctcgcctacgagcacatgaatgagcccgagaagatcgtcgtc
gagagcgagttcatcaccgcggcgaaggtgcgccagaaggtgtactacccctcggacgag
gagaagatcccgctgctgctgggcctgctgtcgcgcagcgaaggcgcgcgcacgatggtg
ttcgtcaacaccaaggcattcgtcgagcgggtggcgcgttcgctggaaaaggccggctac
cgcgtcggcgtgctgtcgggcgacgtgccgcagaagaagcgcgagtcgctgctgaagaag
ttccaggccggccagctcgagatcctggtggccaccgacgtcgccgcgcgtggcctgcat
atcgacggcgtcagccacgtctacaactacgacctgccgttcgatgccgaggactacgtc
caccgcatcggccgcaccgcacgcctgggggccgaaggtgacgcgatcagcttcgcctgc
gagcgctatgcgatgtcgctgcccgacatcgaggccttcatcgagcagaagctgccgctg
gagccggtcaccgccgagctgctgaccgcgctgccgcgcaagccgcgcgaaggcgtcgag
ttgcaggcggaagagggcgagagcatcggcgagatcttccgcgaggcgcgcgagcagcgc
gccgccgacgatgcccgccgcggcgggccgcgcaagggcggaacgggtggcgcaggcgcc
ggccgccgcagcaacggtgggcgtggttcgtcgggcgcagccgggtcgggcgagcgtcgt
ggtccgcgcagcagcgacgacgcccatgtcgcggcgtcgccggacgcggcacctgcagcc
gtcaccaatggtggcgcagctgctgcggtcgtcacggccgagggcgcaccggccaatgcg
ggtgatgccgcggcaccggcgcgcaagcgtcgccgccgccgtggcccgcgcaaggacggg
gatgccgcaggcgcttccgcgcaggcggcggcaccggcgaccggcgaggccggcaccgct
gcagcgcgcggtccgcgaccgccgcgccagggtggtacggaaggtggcgcgacacgcgcg
ccgcgggcaccacgcgagagcgcggcgtcgtccgcaacgccacgtgccccgcgggacagc
gcggcggctcctgccgctgcgcgcccggcacctgcgtccacccagccgtcgccgtcactg
ctgtcgcgcatcggacgcggcctgaagcgtctggttggcggttccaccgacgcccgctga
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