Lutibacter profundi: Lupro_05565
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Entry
Lupro_05565 CDS
T04235
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lut
Lutibacter profundi
Brite
KEGG Orthology (KO) [BR:
lut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lut03016
]
Lupro_05565
Enzymes [BR:
lut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Lupro_05565
Transfer RNA biogenesis [BR:
lut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lupro_05565
Prokaryotic type
Lupro_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMC10741
UniProt:
A0A0X8G610
LinkDB
All DBs
Position
complement(1248028..1248780)
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AA seq
250 aa
AA seq
DB search
MRYFIELSYKGTNYHGWQLQPNAISIQELINNAFTTIFRTEINVVGAGRTDTGVHAERLF
AHVDFDDEIDIKDIIYRLNSLLPNDIVINNISKVSKNAHARFDATSRSYEYRIFLGRNPF
LTETTWQLTNKKLNIIKMNEAAKILLNYTNFKSFARANSNVKTYNCEIKKAVWIVTDKML
TFHITADRFLRNMVRAIVGTLLDVGNNKITLEDFKQIIESRDRCNAGTSAPSQGLFLTSV
TYPKTIFMNE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttattgaattatcatataaaggaacaaattatcatggttggcaactacaa
ccaaatgctattagtattcaggaattaataaacaatgcttttacaactattttccgaaca
gaaataaatgtggttggtgctggaagaacagatacaggtgtgcatgctgaacggcttttt
gcacatgtagattttgatgatgaaattgatattaaagatataatttatagattaaattcc
ttattgccaaatgatattgttataaataatatttcaaaagtttctaaaaatgctcatgca
cgttttgatgcaactagtagaagttatgaatatcgtatttttttaggaagaaatcctttt
ttaactgaaactacttggcagcttactaataaaaagttaaatattattaaaatgaatgaa
gcggcaaaaattttattaaattacactaattttaaaagttttgcacgtgccaattctaat
gttaaaacatataattgtgaaattaaaaaagcagtatggattgtaacagataaaatgcta
acttttcatattacagcagatagatttttaagaaatatggtgagggcaattgtaggaaca
ttacttgatgttggcaataataaaataacattggaagattttaaacaaataattgaaagt
agagatagatgtaacgcagggacttctgcaccgtctcaagggttgtttttaacaagcgtt
acctatccaaaaacaatttttatgaatgagtaa
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