Lactobacillus ultunensis: H4B44_02540
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Entry
H4B44_02540 CDS
T07197
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
luu
Lactobacillus ultunensis
Brite
KEGG Orthology (KO) [BR:
luu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luu03019
]
H4B44_02540
03009 Ribosome biogenesis [BR:
luu03009
]
H4B44_02540
Enzymes [BR:
luu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H4B44_02540
Messenger RNA biogenesis [BR:
luu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H4B44_02540
Ribosome biogenesis [BR:
luu03009
]
Prokaryotic type
rRNA helicases
H4B44_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QQP28995
LinkDB
All DBs
Position
510079..511440
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFEDSRIKPAIQEGLKKIHFNKPTKVQEKVIPAMLSDLSVIVQAATGSGKTHAYLVP
IFNEIEEDAHYVQAIITLPSRELADQLYQVARELRNASGMHFSIAHLAGGTDRERQLEKY
ENRTPQLVIATPGRLLDFVQKKVFAVDQIKTFVIDEADMTLDMGFLSDIDQVAAKMPKEV
QIAAFSATIPVKLANFLRKYMAHPDEIVIDNPAVIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEDLE
KMGVHFDFVEVKNGELVPRKHYRSRENRQGKNRKLDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKRRREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttgaagattccagaattaagcctgctattcaagaaggtctaaagaag
attcattttaataagccaacaaaggtacaagaaaaagttattcctgctatgctttctgac
ttaagcgtgatagttcaagctgcaactggttcaggcaagacgcatgcatacttagtgcca
atttttaatgaaattgaagaagacgctcattacgtacaggcaattattactttgcctagt
cgagaattagcagatcaactttatcaagtagcacgtgaattgagaaatgcgtcggggatg
cacttttcgattgcccacttagctggtggtactgatcgtgaaagacaactagaaaagtat
gaaaatcgtacccctcaactagtaattgcgactcctggtcgtctgcttgattttgtacaa
aaaaaggtctttgccgttgatcaaataaagacttttgtcattgatgaagctgatatgacg
ctggacatgggctttttgtctgatattgatcaggtagctgctaaaatgcctaaagaagta
caaattgctgccttttcagctacaattccagttaaattggctaactttttacgtaagtac
atggctcacccagacgaaatcgtcattgataatccagcagttattgcgccaacaatcaag
aatgatttgctcgatattggttctaaaaaccgtaagagcgtgctttacaagctattaact
atgggtcaaccatacttagctttggtttttgccaatacaaaacaaactgttgatgagtta
actagatatttgcaagatcagggcttaaaggtagccaagattcatggtggcgtaactgaa
agagaacggaagcggactcttcgtcaagttgaacagggacaattccaatacgtagtcgcc
agcgatttagctgcgcgtggtttggatattgacggtgtcagcttggttatcaactatgag
attccaagagacatcgaatttgtgattcaccggatcggtcgtactggtagaaatggtttg
tctggtcatgccataactttgattcgtgaagaagaaatgaaccgtatcgaagatttggaa
aagatgggcgttcattttgactttgttgaagttaaaaatggtgaattagttccgcgtaag
cattatcgcagtcgtgaaaatcgtcaaggtaagaatcgcaaacttgatactaagttggta
ggctacgttaagaaagaaaagagaaaacgtaagcctggctacaagaagaagatcaaacga
gcaattcaggaagataatcgacaaaaacgcaagcttgaacaacgtcatgaaatcagaaag
gctaagcgtttaagaaaacgtcgtcgtgagcaagggcgttga
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