Lactobacillus ultunensis: H4B44_06415
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Entry
H4B44_06415 CDS
T07197
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
luu
Lactobacillus ultunensis
Brite
KEGG Orthology (KO) [BR:
luu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
luu03016
]
H4B44_06415 (rnz)
Enzymes [BR:
luu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
H4B44_06415 (rnz)
Transfer RNA biogenesis [BR:
luu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
H4B44_06415 (rnz)
Prokaryotic type
H4B44_06415 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QQP27765
LinkDB
All DBs
Position
complement(1286004..1286942)
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AA seq
312 aa
AA seq
DB search
MELEFLGTGAGQPSKQRNVSCVALKLLDELNEIWLFDVGEATQHQILRTNIRLRKITKIF
ISHNHGDHIFGLPGLLSTRSFQGDVGPLTIYGPAGIEQFVKTSLKVSRTKVSYPIKFVEL
SKPGLICQDKSFRVYTDRLDHRIPSFGFRIVEDSHPGELLIDKLAKYNVPNGPLLGKLKQ
GQQIVLSDGTVLNGKDFLGPEKPGRIVTIIYDTRSTPSIARLAKDADVLVHESTFAGDEA
KMAHNYYHSTSVQAAQIARQENVKKLCLNHISARYMGAKAKKLENQAKKVFPNTILVNDF
DRVNIPMKGSEE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaattagaatttttaggcaccggagcagggcaaccatctaagcagcgcaatgtttct
tgtgttgcattaaagctattggatgagctaaatgaaatatggctatttgatgtgggagag
gcaactcaacatcaaattttgagaacaaatattagactccgcaagattaccaagattttt
atttcgcataatcacggggatcatatttttggtttgccaggtttattgtcaactcgttca
ttccaaggtgatgtaggtcctctaacgatttacggtcctgcaggtattgaacaatttgtt
aagacttctttgaaagtatcaagaacgaaagtttcatatccaatcaagtttgttgaatta
tctaaaccaggtttaatttgtcaggataaaagttttcgtgtttatactgatcgcttggat
caccgaatacctagttttggttttcgaatagttgaagattctcatcctggtgaattatta
attgataaacttgcaaaatataatgtcccgaatggaccacttcttggtaaactaaagcag
ggacagcaaattgtcttgtcagatggtactgtcttaaatggtaaagactttttgggccct
gagaaaccaggccggattgttaccattatttatgatacccgttcaactccaagtattgct
cgtttggctaaggatgcagacgtattggtacatgaatcgacttttgcaggggatgaagcc
aagatggcacataactattatcattctacttccgttcaggcggcacagattgctcgccaa
gagaatgttaagaagctatgtctaaatcatatttctgctcgctatatgggtgcaaaagca
aagaaattagagaatcaagctaaaaaagtatttcctaatactattttggttaatgatttt
gatcgggttaatattccaatgaaaggttcagaagaatga
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