Lactobacillus ultunensis: H4B44_06980
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Entry
H4B44_06980 CDS
T07197
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
luu
Lactobacillus ultunensis
Pathway
luu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
luu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4B44_06980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luu03400
]
H4B44_06980
Enzymes [BR:
luu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H4B44_06980
DNA repair and recombination proteins [BR:
luu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4B44_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
AAA_5
AAA
DEAD
nSTAND3
RsgA_GTPase
SLFN-g3_helicase
UvrD-helicase
NTPase_1
UvrD_C
AAA_28
PIF1
Virulence_fact
T2SSE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QQP27869
LinkDB
All DBs
Position
complement(1406234..1408597)
Genome browser
AA seq
787 aa
AA seq
DB search
MVEFTGKVNGIVFENDKDLYKILDVEIIGSLENYSRDEIKVTGNFGDIQIESSYRFEGKL
VMHEKFGLQFRASSYKQVLPHEEGSLTKYLSSNKFPGIGKKAANTIIDELGLNALDVLKE
NPAKIDTLSLSSKQKDSLLSGLNAMDSYSEIVLKLAQYGINKRIAGKVYQLYHGDSLKKL
EKDPYATVNDVAGFGFKTADIMGKQLDIKVDDPRRINGAIYQVLLDALNGDGNTYVKSPE
LLTEASKLLQINQFDPIANCVINLCQQGKIVVDGDKVSLQNIFKTEQDIARSMKYLVETR
KQQEDEQYGDDDVAEAIRDAEKELEIKYDDTQKLAIKNALNHPISILTGGPGTGKTTIIN
GILLALRKLAEIPASALYSEDPPFLLAAPTGRAAKRMSEVTGISAKTIHRMLGLGIGDTG
TEELNELNGEILIIDEMSMVDMFLFKQLLSSINQVRHIVFVGDKDQLPSVGAGNVFSDLI
KSRAFPTTILKQIHRQGDDSTIITLAHDINEGKNEQALFKRTKNYSFISCRPELVGDAVG
QIVTLALKRGFAKDDIQVLGAMYHGNGGVNNLNDIIQEIMNPAKEHSKSLEAHNEIFRIG
DRILQLQNNPEKDIYNGQIGKIMSIDEDKSKECMVANFDGREVTFDRKDLNDLTRAYAIT
IHKSQGSEFPLVVLNLTMQNYVMLKRNLLYTAVTRAEKNLVLVGDPRAFVAAFKTPGNDR
KTDLADKICKQLGIELEENKSEQVKKQVKEEKTEKSTKKETEDYILTPEKIYSGEIDPMI
GMENIKL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatttaccggtaaggttaacgggatcgttttcgagaacgacaaggatttatat
aagattttagatgtagaaattattggctcactggaaaactattcacgtgatgaaattaaa
gtgaccggtaattttggtgatattcaaattgagtcaagttatcgttttgagggaaaactt
gtcatgcatgagaagtttggcttgcagtttagagcaagtagctacaagcaggttttacct
catgaggaaggctcactcactaaatacttaagttcaaataaatttccaggtattggtaaa
aaagcagctaatacgataattgacgaactgggattaaatgcgttagatgttttgaaagaa
aatccagcaaagattgatacattgtcgttatcaagtaagcagaaggacagtttattgtcc
ggcttgaatgcgatggattcgtattcagaaattgttttgaaattggcacagtatggtatt
aataaacgtattgctggtaaagtatatcaactttatcatggtgatagtttaaaaaaatta
gaaaaggatccttatgctactgtaaatgatgttgctggttttggctttaaaacggctgac
attatgggaaagcaattagatattaaagttgacgatcctcggcgaattaatggagcaatt
tatcaagttttgttggatgccttgaatggtgacggcaatacttacgtaaaatcgccagaa
ttgttgactgaagctagcaaattattacaaataaatcagtttgatccaattgctaactgc
gtgattaacttgtgtcaacaaggaaaaattgttgttgatggcgacaaagtttctttacaa
aatatttttaaaactgagcaggatatagctcgatcaatgaaatatttggtagaaactaga
aagcaacaagaagatgaacaatatggcgatgatgatgtagctgaagctatccgagatgcc
gaaaaagaattagagatcaaatatgatgatacacagaaacttgcaataaagaatgcattg
aatcatccgatttctattttgacaggggggcctggtacaggtaaaacaactatcattaac
ggaatcttgctagctttaagaaaattagctgaaattccagcttctgcactatatagtgaa
gatccaccatttcttttggctgctcctactggtagagctgctaagaggatgagtgaagta
actggtattagcgctaaaacaattcatcgcatgttaggactaggtattggtgatacaggt
accgaagaattaaatgagttgaacggagaaattttgattatcgatgaaatgtcgatggtt
gatatgttcttgtttaaacaattattatccagtattaatcaagttcgacatattgttttt
gtaggtgataaagatcagctcccatctgtaggagcgggaaatgtttttagtgatttaatt
aagtcgcgtgcattccctactactatcttgaaacagattcatagacaaggtgatgattct
acaattatcactttggctcatgatattaatgaaggtaaaaatgagcaggctttgttcaaa
cgaacaaagaattattcgtttattagttgccgaccagaattagtcggagatgcagtcggt
caaattgttactttagctctcaagcgtggttttgctaaagatgatattcaagttttaggt
gccatgtatcatggaaatggtggagtaaataatctgaatgatattattcaagagattatg
aatccagctaaagagcattctaaatctttagaagctcacaacgaaattttccgaattggt
gatagaattttacagttacagaataatccagaaaaagatatttataatggtcagattggc
aaaattatgagtattgatgaagataaatctaaagaatgtatggtagccaattttgatgga
agagaagtcacttttgatcgtaaagatttgaatgatctgacacgagcatatgcaattact
attcacaagtctcaaggctcagaattccctctagtagttttgaacttaactatgcaaaac
tatgtaatgcttaagcgaaatctcctgtatacagctgtaacgcgggcagagaagaattta
gtgcttgtgggtgatcctcgtgcttttgtagcagcttttaagacacctggtaatgatcgt
aagactgatctagcggataagatttgtaagcaattaggtattgagcttgaagaaaataag
tctgagcaagttaagaaacaagtaaaagaagaaaaaacagaaaaatctactaaaaaagaa
acggaagattatattttaactcctgagaaaatttattcaggagagattgatccaatgatt
ggaatggaaaatatcaaattataa
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