Lactobacillus ultunensis: H4B44_08540
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Entry
H4B44_08540 CDS
T07197
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
luu
Lactobacillus ultunensis
Pathway
luu03420
Nucleotide excision repair
luu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
luu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4B44_08540 (pcrA)
03430 Mismatch repair
H4B44_08540 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
luu03400
]
H4B44_08540 (pcrA)
Enzymes [BR:
luu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4B44_08540 (pcrA)
DNA repair and recombination proteins [BR:
luu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4B44_08540 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H4B44_08540 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QQP28147
LinkDB
All DBs
Position
complement(1741430..1743676)
Genome browser
AA seq
748 aa
AA seq
DB search
MSENSILASLNPQQKKAVETTEGPLLVVAGAGSGKTSVLTRRIAYLVEENHVAPWNILAI
TFTNKAATEMRDREQGLLGPAAENIWMSTFHALCVRILRRDADKIGYSHNFSIADSAEQL
TLVKHIEKDLNINPKMYDPRGVLAAISNGKNDLLDPEAYTASASSPFEKMTAKIYQEYQR
RLRRDQIMDFDDLIMQALVLFKKDPETLHYYQNKFRYILVDEYQDTNEAQYQLCHALAAQ
YKNICVVGDADQSIYGWRGANMENIMNFEHDYKKDGVKTVKLEQNYRSTGHILSAANSVI
KNNQNRKSKNLWTDCGEGQKVTYYQAQSGDNEAHYIISKIQEEVKDKKRSYKDFAILYRT
NAQSRTVEEAFVKSNIPYQIVGGHKFYDRKEIKDIMAYLKLVANPADTMSMNRIINTPKR
GIGAATVDKLMTFADENHYNTLDAMEHVAESPINTRAAKKLSDFGAKLRDAIVFAQNHGV
TGLTEKILEDFDYTDALKAENTIESETRLENLDEFLSVTKRFDDHYEPEEDDSNPLSDFL
AEVSLLSDQDDLDEDDNQVALMTLHAAKGLEFPVVFLIGMEDGLFPLQRSMMDDNELEEE
RRLAYVGITRAKQELFLTNAYSRMMYGRTQSNPPSRFLDEIDPKDLHKEENEKLQSSFIK
SSFESRPAPFARKEERARATVYTAKKASGAVGAEKKGWHVGDQVEHKAWGRGVVTKVNGT
GEDMELDIAFPDKGIKRLLAAFAPIKKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaattctatcttagctagcttaaatccgcagcagaaaaaggcggtcgaaact
actgaaggaccacttttggttgttgctggtgcgggttcaggtaaaacttctgttttaaca
agacgtattgcttacttagttgaagaaaatcatgtggcaccttggaatattttagccatt
accttcactaataaggcggctactgaaatgcgtgatcgtgaacaaggcttgcttggtcca
gctgctgagaacatttggatgtcgactttccacgctttatgtgtcaggattttgcgtcgg
gatgcggataagattggttacagtcataatttttcaattgcggattcagctgaacaatta
actttagttaagcatattgaaaaggacttgaatatcaatcctaagatgtatgatccgcga
ggcgtattagctgccatttctaacggcaagaacgacttgcttgatccagaagcctatacg
gccagtgcatcttcgccttttgaaaagatgacggctaagatctatcaagaatatcaaaga
agattgcgtcgcgaccaaatcatggactttgatgatttgatcatgcaagctttagtttta
ttcaaaaaagatccagaaactttgcattactatcaaaacaagtttcgttatattttggta
gatgagtatcaggatactaatgaagcccaataccagttatgtcatgcgttagctgcgcaa
tataagaatatttgcgtagttggggatgccgatcagtctatctatggctggcgtggtgct
aatatggaaaacatcatgaacttcgagcatgactacaagaaggatggtgttaagactgta
aagctggaacaaaattatcgttcaaccggtcacattttgtcagctgcgaactctgttatt
aagaacaaccagaatcgtaagtctaagaacttgtggactgactgcggcgaaggacaaaaa
gtaacttattatcaagcccaaagcggtgacaatgaagcccattacatcatttctaagatc
caagaggaagttaaagataagaaacgttcatacaaagactttgccattctttatcgaact
aacgcacaatcacgtacagtcgaagaagcttttgtaaaatcgaatattccttatcaaatc
gtaggtggacacaagttctacgaccgtaaggaaattaaggatattatggcttacttgaag
ttggtagctaacccagctgatacgatgagcatgaaccgaatcatcaacacgcctaaacgt
ggtattggagccgcaactgtggacaagttgatgacctttgcggatgaaaatcactataat
acgttagatgcgatggaacatgtagctgagagcccaattaatactcgagctgctaaaaag
ttaagcgattttggcgctaagttgcgagatgctattgtttttgcacaaaatcatggtgta
actggtttaactgaaaaaatcttggaagattttgattacactgatgctttaaaagcagag
aatacgatcgaatctgagactcgtttggaaaacttggacgaattcttgtctgttactaaa
cggttcgatgatcactacgagccagaagaagatgattctaatccattaagcgattttttg
gctgaagtttcattattgagtgaccaagatgatttggatgaagatgataatcaagttgct
ttgatgactctgcatgctgctaaggggcttgaattccctgtagttttcttaattggcatg
gaagacggcttgttccctctgcagcgttcaatgatggacgataatgagttggaagaagag
cgtcgtttagcatatgtagggattacgcgtgctaagcaagaactattcttgaccaatgca
tattcacgcatgatgtatggtagaactcaaagtaatccaccttctagatttttggatgaa
atcgatcccaaagatttgcataaggaagaaaatgaaaaattgcaaagcagctttatcaag
tctagctttgaatctcgtcctgctccttttgccagaaaagaagaacgtgctcgtgctacg
gtttatactgctaagaaggccagtggtgctgttggtgctgaaaagaagggctggcatgtt
ggcgaccaagtggaacacaaagcttggggccgcggtgtcgttacaaaggttaatggcact
ggtgaggatatggaattggatattgctttcccagataagggcatcaagaggcttctagct
gcgtttgccccaattaaaaaggtataa
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