Lutimonas zeaxanthinifaciens: QZH61_00425
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Entry
QZH61_00425 CDS
T09226
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
luy
Lutimonas zeaxanthinifaciens
Pathway
luy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QZH61_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
luy03019
]
QZH61_00425
03016 Transfer RNA biogenesis [BR:
luy03016
]
QZH61_00425
Enzymes [BR:
luy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QZH61_00425
Messenger RNA biogenesis [BR:
luy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QZH61_00425
Transfer RNA biogenesis [BR:
luy03016
]
Prokaryotic type
tRNA degradation factors
QZH61_00425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
WKK66105
LinkDB
All DBs
Position
94821..96968
Genome browser
AA seq
715 aa
AA seq
DB search
MIPKVFNEVIDLGDGRQISIETGKLAKQAHGSVVVQMGNAMLLCTVVSNYEASAVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSNDEILTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDDDVMPDALAGLAASAAIQLSDIPFETAISEVRVARIDGEFVINPSRAQLELSDLDMMI
GASSDSVMMVEGEMDEISEEEMAEAIKFAHEAIKVQCEAQIKLAEAFGKKETREYEPEEE
NEELASKIHEAAYQKCYDIAKQGTSKQERSLAFAEVKEEITASFSEEELEEFGGMIGKYF
GKAQKEAVRELTLSEGLRLDGRQTTEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSRESSTIDLPSYQGEETFYLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGIKLKKPVSGIAMGLISDGDRYAVLS
DILGDEDHLGDMDFKVTGTKDGITACQMDIKIKGLSYDILVSALKQAKDGRLHILSKLTE
TISEPNKDVKAHAPKMVTRTIPGDYIGALIGPGGKVIQELQKETGTTIVINEVDEEGVVE
ILGTEQEGIDKVLAKIKAITFKPERGSIYEVKVIKILDFGAVVEYTEAPGNEVLLHISEL
AWERTNNVTDVVNLGDIIDVKYFGVDPKTRKEKVSRKALLKRPERENRKPSRDDK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtttttaatgaggtcattgaccttggtgatggaagacagatttccatc
gaaaccggaaagttagcgaaacaagctcacggttcggtagttgtacagatgggtaacgcc
atgttactttgtacagtagtatcaaattatgaagcaagcgctgtagattttcttccatta
actgtggactatagagaaaagtttgcggctgcaggaagatatcctggcggattctttaaa
agagaagcaaggccgagtaatgatgaaatactaaccatgaggttggtagacagagtttta
cgacctcttttcccgaaagattaccatgcagagactcaggtaatgatacaattgatgtca
catgatgacgatgtgatgcccgatgcattggcagggttagcagcttcggccgcgatccag
ctaagcgacattcctttcgagactgctatttcagaagttagagtagcaagaatcgatgga
gaatttgtgatcaacccaagcagagctcagttagaattatctgatctggatatgatgatt
ggtgcgtcttcggactctgtaatgatggttgaaggtgaaatggacgaaatttctgaagaa
gaaatggcagaggctatcaaatttgcccatgaagcgattaaggttcagtgtgaggctcaa
atcaaattagcagaagcattcggaaagaaggaaacaagagaatacgaaccggaagaagaa
aatgaagagttagcttctaaaatacatgaagcagcatatcagaagtgttatgatattgct
aaacaaggaacttcaaaacaggagaggtcattggcttttgcagaggtaaaagaagaaatc
acagcttctttttctgaagaagagcttgaagagttcggtggaatgatcggaaaatatttt
ggtaaggcgcagaaagaggctgttagagaacttactctttctgaaggactgagactggac
ggtagacaaacaactgagataaggccaatttggtgtgaggttgattatttgccatcaaca
catggttcatctatttttacaagaggagaaactcaggctcttgcaacggttactttggga
acttccagagaatcaagcaccattgatttaccgagttatcaaggagaagaaactttttac
ttgcattataacttccctccctttagtacaggggaagccagaccattaagaggaacttca
agaagagaggtaggacatggtaatcttgctcaaagagctttaaaagggatgattcctgag
gattgtccatatactgtgcgtgttgtaagtgaagttttagaaagtaacggatcttcatcc
atggcaactgtttgttccggaacaatggctttgatggatgcaggtatcaagttgaaaaaa
ccggtttccggtattgcaatgggattgatctcagatggagacagatacgcagttctctcg
gatattttaggagatgaggatcatcttggagatatggacttcaaagtgacgggaacaaaa
gatggaattacggcttgtcagatggatattaagatcaagggcctttcatatgacattctt
gtcagcgcattaaaacaggctaaagatggtcgtttacacattttatcgaaattgactgag
actatttcagagcctaataaggatgttaaagcgcatgctccaaaaatggttacaagaact
attcctggtgattatattggtgctttgataggtccgggaggtaaagttattcaggagctt
cagaaagaaacaggcactacaattgttatcaatgaagttgacgaagaaggtgttgttgag
atccttggaacggaacaagaaggaattgacaaggttctagcgaagatcaaagccattact
tttaaaccggaaagaggaagtatttacgaagtaaaagtgatcaaaattcttgatttcgga
gcggtagttgaatataccgaggcaccaggtaatgaagtcttgcttcatatctctgaactt
gcctgggaaagaaccaataatgtaactgatgttgtcaatttaggagatatcatcgatgtt
aaatattttggtgtggacccaaaaacgagaaaggaaaaagtttcaagaaaggctttgctt
aaaaggcctgaaagagaaaacagaaaaccttcaagagatgataaatag
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