Lutimonas zeaxanthinifaciens: QZH61_03730
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Entry
QZH61_03730 CDS
T09226
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
luy
Lutimonas zeaxanthinifaciens
Brite
KEGG Orthology (KO) [BR:
luy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
luy03009
]
QZH61_03730 (rlmD)
Enzymes [BR:
luy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
QZH61_03730 (rlmD)
Ribosome biogenesis [BR:
luy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QZH61_03730 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
Cons_hypoth95
Methyltransf_15
MTS
UPF0020
PrmA
TRAM
Methyltransf_ANTKMT
FtsJ
PCMT
Methyltransf_37
Methyltransf_11
DUF5677
N6_N4_Mtase
Methyltransf_12
Methyltrans_SAM
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
WKK66734
LinkDB
All DBs
Position
complement(844840..846252)
Genome browser
AA seq
470 aa
AA seq
DB search
MSRKKKFHLFENVEIIDTAARGKSVAKSPDGRVVFVSNAVPGDIVDIKTGRKRKSYYEGK
AIKFHHYSKKRVAPECEHFGICGGCKWQHMNYKDQLAYKQKEVTNNLLRIGHLELPEITP
IAGCKETYFYRNKMEFSFSDSRWLTEEELKSEEEFTDKNALGFHIPGMWDKILDIKKCHL
QEDPSNLIRNSIKEFAVKNNIDFFNPRHRTGLLRTLMIRISSIGEIMLVIQFFKEDVEKR
ELLLNYIADNFKDITSLQYIINEKGNDSIYDQDIILFKGRDHIFEEMEGLKFKIGAKSFY
QTNSAQAYELYKIARDFADIKNDEIIYDLYTGTGTIAQFVASKAKKVIGVEAVPQAIEDA
RENARMNGIDNAVFYEGDMAKVFTEDFIKQNGHPDLIITDPPRDGMHQKVVKQILAIMPE
KVVYISCNSATQARDLALMKDHYTIKKSQAVDMFPQTHHVENVVLLKKKK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaaaagaaatttcatttatttgaaaatgttgaaattatcgacactgccgcc
agaggaaagagtgtagccaagtcacccgatggaagagtggtttttgtcagtaacgcagta
ccgggtgatattgtagatatcaaaactggtcgaaaacgcaaatcttattacgagggtaaa
gccataaaatttcaccattattccaaaaaaagagtagctccggaatgtgagcattttggt
atctgtggaggttgcaaatggcaacatatgaattataaggaccaacttgcctataagcag
aaagaagttacaaataaccttttgcgaattggtcatcttgaattacccgaaatcaccccg
attgcaggatgcaaggagacttacttttatagaaacaaaatggaattttccttttctgat
tcaagatggcttactgaggaggagttaaagagcgaagaggaatttaccgataaaaatgcc
ctgggttttcacattcccgggatgtgggacaaaatacttgacatcaaaaaatgtcattta
caggaggacccatcaaatctgatcagaaattcgataaaggagtttgccgtaaagaacaat
atagacttttttaatccaaggcacagaacagggcttttaagaaccctaatgattaggatc
agttcaataggtgagatcatgcttgtgattcagttttttaaagaagatgtcgaaaagaga
gaacttttgctcaattatattgcagataacttcaaagacattacctcgcttcaatacatt
atcaatgaaaaaggtaatgattccatttacgatcaggatataattctttttaaaggcaga
gatcatatttttgaagaaatggaagggctcaaatttaaaattggtgccaaatccttctat
cagaccaattcagcacaggcttatgaactttacaaaattgcaagagattttgccgatatc
aaaaacgatgaaattatatacgacctttataccggtacgggtacaatagcacagtttgtt
gcatcaaaagcgaaaaaagtaataggggttgaagccgtacctcaggccattgaggatgcc
agggaaaacgccagaatgaatggaattgacaatgcggtattctatgaaggagatatggcg
aaagtatttactgaggattttataaaacaaaatggacatccggatctgattatcacagac
cctccaagagacggaatgcatcaaaaagtggtaaaacaaattttagccataatgccggaa
aaagttgtttatattagctgtaattctgcaacccaggcaagggatctggcacttatgaaa
gatcattataccattaaaaagtcccaggcagtagatatgtttccgcagacgcatcacgtg
gaaaacgttgtgcttttaaagaagaaaaaataa
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