Lutimonas zeaxanthinifaciens: QZH61_03770
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Entry
QZH61_03770 CDS
T09226
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
luy
Lutimonas zeaxanthinifaciens
Pathway
luy03030
DNA replication
luy03430
Mismatch repair
luy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
luy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QZH61_03770 (dnaE)
03430 Mismatch repair
QZH61_03770 (dnaE)
03440 Homologous recombination
QZH61_03770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
luy03032
]
QZH61_03770 (dnaE)
03400 DNA repair and recombination proteins [BR:
luy03400
]
QZH61_03770 (dnaE)
Enzymes [BR:
luy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QZH61_03770 (dnaE)
DNA replication proteins [BR:
luy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QZH61_03770 (dnaE)
DNA repair and recombination proteins [BR:
luy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QZH61_03770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Cytochrom_C_2
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WKK66742
LinkDB
All DBs
Position
853497..857816
Genome browser
AA seq
1439 aa
AA seq
DB search
MYLIFDTETTGLPKNWNAPVTDVDNWPRCVQIAWQLHDEMGRMVSHEDYLIIPQNYTIPY
DAEQIHGISTDLARERGRPLTEVLELFNQALSKSRFVVGQNLNFDLNIMGCEYHRLGMET
NLNSIPVLDTCTEKTALLCEIPGGRYGKFKLPTLTELHEKLFNEPFQEAHNATADVEATT
RCFLELIRGGNYTEAELKVDSSYFRDFTEHNTEVFQPAGLKHQNLKKESEKLRKAAVKSD
VTDTVINDQHIEALKEARFAHLHNHSQYSILQSTSNIGELVKAAADNDMPAVALTDTGNM
MGAFVFVKTVLNHNKNAEKPIVPIIGCEFNVCENHQDKSHKDNGYQVVLLAKNKKGYHNM
AKLASTAFIDGFYYVPRIDKKLIQEYKEDIIVLSGGINGEIPNKILNIGEHQAEEALLWW
KQEFGQDFYLEISDHQQENEKHINEVLIDFSRKHGVKLVATNNTFYLNKSDSTAHDILLC
VKDGEKIATPKGRGRGFRYGLPNDEYYFKTQDEMKTLFRHVPEAIINIQEIVDKIETFEL
ARNVLLPKFDMPEQFYDSKDEEDGGKRGENAYLRYLTYKGAKDRYPELTEEIKERLDFEL
MIIEKTGYPGYFLIVEDFIKEARNMGVSVGPGRGSAAGSAVAYCLGITNIDPIKYDLLFE
RFLNPDRVSLPDIDIDFDDEGRQRVIDYVINKYGANQVAQIITYGTMAAKSSIRDTARVL
DLPLPDADRIAKLIPGLKLNNIFGTDEKSISKVKGLRSEEKANVDELVSMADGNGIEAET
INQARMLEGSVRNTGTHACGVIITPEDITNLIPVATAKGTDMYVTQFDNGVVEDAGLLKM
DFLGLKTLTLIKDTVKIVKALHGVDLVPDEFPLDDKATYELFQRGETIGIFQYESPGMQK
HMKSLKPTEFADLIAMNALYRPGPMEYIPSFIDRKHGREEIKYDLPDMEEYLKETYGITV
YQEQVMLLSQKLADFTKGQADMLRKAMGKKIFALLEKLKPLFIEGGKKNDHPEEVLEKIW
KDWEAFAAYAFNKSHSTCYAFIAYQTAYLKAHYPAEYMASVLSNNMNDIKQVSFFMEECK
RAGIEVLGPDINESYYKFSVNKQGAVRFGMGAIRGVGEGAVRAIVEERKENGNFRSIFDV
TKRVDLRAANKKAFDGLVLAGAFDSFQTANRSQYFALDDKGITFIEKAIRYGNKYQESKN
SAQVSLFGEASEVQFEEPVIPPCEPWNVMEKLSKEKEMIGIYISGHPLDDFKTEIQYFCN
AGVEALKKINELEGKELSFAGIITDVQHRVSKNGKPWGLFTFEDYSDAHEFRLFNEDYLK
FRHFLIPNTFLYLKTVMRRAWQNGDVRVQITAIQQLQDVLAKMAKKITLNVPIEHISESN
IEKFDKVFKKHQGSQHLNFMIIDQKEKLKLNMPSRSSKINITKELIDELNENEWSFKLN
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttatatttgacactgaaaccactggtttaccaaagaactggaatgcccctgtc
actgatgtggacaactggccaagatgtgttcagatagcctggcaattgcatgatgaaatg
ggaaggatggtatctcatgaagattaccttattatacctcagaattatacgataccttat
gatgctgagcagattcacggtatttcaacggatcttgccagagaaagaggaagaccttta
acagaggttctggaattattcaaccaggcactttcgaaatccagatttgttgtgggtcag
aatttgaattttgacctaaatattatgggttgtgagtatcacaggctgggcatggaaaca
aatctaaattcgatccctgtcctggatacctgtaccgagaaaaccgccctactttgtgag
atacccggaggaaggtacggaaaatttaagctcccgacacttacggaactgcatgaaaag
ctttttaacgaaccctttcaggaagcgcacaatgcaactgctgatgtggaagcaactact
cgatgttttcttgaattaatcagaggggggaattatacagaagcagaactaaaggtagac
agttcttatttcagagattttacagaacataatactgaggtttttcaaccagcgggcctt
aagcaccagaatttaaagaaggaaagtgaaaaactaaggaaagctgcggtaaaatccgat
gtaacggacaccgtaatcaatgatcagcatattgaagcactgaaggaagccaggttcgca
catcttcataaccactcacagtactcaattctgcaatcgacctcaaatattggagagctg
gtaaaagccgcagctgacaacgatatgcctgctgttgccttgacggataccggaaatatg
atgggtgcttttgtattcgttaagacagttctgaatcacaataagaatgctgaaaaacct
attgttcccatcataggatgtgaattcaatgtatgcgaaaaccatcaggataagtcgcat
aaggataatggatatcaggtggtccttcttgccaaaaacaagaaagggtatcacaatatg
gcgaaattagcttcaacggcatttattgacggattctattatgtcccaagaattgataag
aaattgattcaggagtataaagaggatatcatagttcttagtggagggatcaatggtgag
ataccaaataaaattcttaatataggggagcatcaggctgaagaggccttgctatggtgg
aaacaggagtttggtcaggatttttatttggaaattagtgatcatcaacaggagaatgaa
aagcacatcaacgaggtcctgattgatttttccagaaaacacggggtgaaactcgttgcc
acaaataataccttttatttaaataaatcggattcaacggcacatgatatcctgttatgt
gtaaaagacggagaaaaaattgcaaccccaaaaggaagaggtagaggattcagatatggc
ttgccgaatgatgagtattattttaagactcaggatgaaatgaaaaccttgtttcgacat
gttccggaggccataattaatattcaggaaattgtcgataaaattgaaacatttgagctg
gcaaggaatgttcttttgcccaaatttgacatgcccgagcaattctatgattcgaaagat
gaggaagacggtgggaaaagaggtgagaacgcttatctgagatacctgacctataaaggt
gcaaaagacaggtatccggaactgacggaagaaattaaggaacggcttgactttgaattg
atgatcattgagaaaacgggttatcctggttattttttgatcgttgaagattttatcaag
gaagcacgtaatatgggggtttcagttggccccggaagaggttctgcggcaggctcagca
gtagcttattgccttggaataacaaatatcgacccgataaaatacgatttgctttttgag
cgttttcttaaccctgacagggtatcccttcccgatattgatattgattttgatgatgag
ggacggcaacgcgtgattgattatgtaatcaataaatatggagcaaatcaggtggcccag
atcataacttatggtaccatggcggccaaatcctctatcagagatacggccagagttcta
gatttgccgcttccggatgcggatcgaatcgcaaaactgatccccggcctcaagctgaac
aatatttttggaaccgatgaaaagagtatttccaaggttaaaggtttgagaagcgaagag
aaggccaatgtggatgaactggtttccatggccgatggaaacggaattgaagccgaaacc
atcaatcaggcccgaatgctggaagggtcagttcgaaatacaggaacacatgcatgtggt
gttatcattacccctgaggatattacaaatttgattccggtggcgactgccaagggaacc
gatatgtatgtaacacagtttgataacggggtggtagaggatgccggactattaaagatg
gactttctgggattaaagaccctgacccttatcaaagacaccgtaaagattgtaaaagct
ttacatggggtcgatctggttcctgacgagttcccgttggatgacaaagccacttatgag
ctgtttcaacgtggagaaaccattggtatttttcaatacgaatctccagggatgcagaag
catatgaaatcccttaagccaacagagttcgctgacctgattgccatgaacgcactttac
cggccgggacccatggaatatatcccatcctttattgacaggaaacatggaagggaagag
atcaagtatgaccttccggatatggaggaatatcttaaagagacctacggtattacggta
tatcaggaacaggtgatgttgctgtctcaaaaactggctgattttacaaaaggccaggcg
gatatgctgcgtaaggccatgggtaaaaagatttttgcccttcttgaaaaactgaaaccg
ctttttatcgagggaggtaagaaaaatgaccatcctgaagaggtactggaaaaaatatgg
aaagactgggaggcttttgcggcctatgcctttaacaaatcccactctacctgttatgca
tttattgcttaccagacggcctatttaaaggctcattatcctgcagaatacatggcctct
gttttgagcaacaatatgaatgatatcaagcaggtatccttctttatggaggaatgcaaa
agagcgggaatagaggttctgggccctgatatcaatgaatcttattataaattttctgtt
aacaagcaaggggcggttcggtttggaatgggtgccatacgtggagtaggagaaggggct
gtacgtgccattgttgaagaaagaaaggagaacggaaatttccgatcaatttttgacgta
acaaaacgagtcgatctgagagccgcaaacaaaaaagcctttgacggtctggtactcgcg
ggtgcatttgattcttttcagacagccaacagatcgcagtattttgccttggatgacaag
ggtatcacttttatcgagaaggcgattcgttatggaaacaaatatcaggaaagtaagaat
tcggctcaggtctctttatttggtgaagcatctgaggttcagtttgaggaacctgtaatc
ccgccttgtgagccatggaacgtgatggaaaaactttccaaagagaaagagatgatcggg
atttatatatccggccatccactggatgattttaaaacagagatccagtatttttgcaat
gccggagtggaagctttgaaaaagatcaatgaacttgaaggcaaggagctgtcttttgcc
ggtatcatcaccgatgtacagcacagggtaagcaagaacggaaaaccctggggtctattc
acttttgaagattattccgatgcccatgaattccgattgttcaacgaggattatttgaag
ttcaggcattttttaatccccaacaccttcttgtatctaaagacagtgatgcgcagagcc
tggcaaaacggagatgtaagggttcagatcacggcgatccagcaattacaggatgtactg
gccaaaatggctaaaaagatcacgcttaatgttcccattgaacatatttccgaatcaaat
attgaaaaatttgataaggtttttaaaaagcatcagggtagccagcatctaaatttcatg
atcatagatcagaaagagaaacttaaattgaacatgcccagccgaagctcaaaaataaat
atcacaaaggaacttattgatgagctcaacgaaaatgaatggagttttaaattaaactag
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