Lutimonas zeaxanthinifaciens: QZH61_03810
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Entry
QZH61_03810 CDS
T09226
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
luy
Lutimonas zeaxanthinifaciens
Pathway
luy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
luy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QZH61_03810 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
luy03021
]
QZH61_03810 (rho)
03019 Messenger RNA biogenesis [BR:
luy03019
]
QZH61_03810 (rho)
Transcription machinery [BR:
luy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QZH61_03810 (rho)
Messenger RNA biogenesis [BR:
luy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QZH61_03810 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Mor
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WKK67577
LinkDB
All DBs
Position
complement(865729..867465)
Genome browser
AA seq
578 aa
AA seq
DB search
MFDIDKLKEMKLLELQEIAQKIDVPKFRQLKKLDLVYQILDMQAANPKQMKEKTAPLKEN
TSPVAKPKRKRISKNDAAPEKASPATATKNEVPSKKDVDKRDVEPAKHPKPEVSEQTKKE
TGPVQKTDSKPATTDRNQQSNQQKDQRKQHHSQQKDQRKQHPSQQKDQKDQKNQQKDQRK
DNRGNQSHKQRGNESNKPGKYRDPDFEFDGIIESEGVLEIMPDGYGFLRSSDYNYLSSPD
DIYVSQSQIKLFGLKTGDTVKGKVRPPKEGEKYFPLIRVSLINGLNPSIVRDRVSFEHLT
PLFPEEKFNLAEKGSNLSTRIIDLFSPIGKGQRGMLVAQPKTGKTILLKDIANAISANHP
EVYQIVLLIDERPEEVTDMQRNVTGEVIASTFDESAEKHVRVANIVLEKAKRLVECGHDV
VILLDSITRLARAYNTVAPASGKILSGGIDANALHKPKRFFGAARNIENGGSLSIIATAL
TETGSKMDEVIFEEFKGTGNMELQLDRNISNRRIYPAIDLVKSSTRRDDLLHEEKVRQRI
WVLRKYLADMNPIEAMEFVKDKIKFTNNNEEFLMSMNG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacatagacaaactcaaagagatgaaacttttggagttgcaggaaattgctcaa
aaaattgatgttccaaaatttcgtcagcttaaaaaacttgatttggtttatcaaatactt
gatatgcaggccgcaaatccaaagcagatgaaggaaaagactgcgccacttaaggaaaat
acttcgccagtcgccaaacccaagagaaaaagaatttcaaaaaatgatgcggctcctgaa
aaggcatcccctgccaccgcaacaaagaacgaggttccttcaaaaaaagatgtggataag
agagatgtggaaccagcaaaacatccaaaacctgaagtttcagagcaaactaaaaaagaa
actggtcctgttcaaaaaacagattctaaaccggcaactactgatcgtaatcaacaaagc
aatcagcagaaagatcaaagaaaacagcatcattcgcagcaaaaggatcagcggaagcaa
catccatcccagcaaaaggatcaaaaagatcaaaaaaatcagcagaaggatcagagaaaa
gataatcgtggtaatcaaagtcacaaacaacgtggtaatgagagcaacaaaccaggtaaa
tacagagatcccgattttgaatttgacggaatcatagaaagtgaaggtgtgttggaaatc
atgccggatggatatgggtttttgagatcttcggactacaattacctttcatctccggat
gatatctatgtttctcaatcgcaaattaagctattcggacttaaaacaggagatacagta
aaaggaaaagtcaggcctccgaaagaaggtgaaaaatattttccactgatacgcgtaagt
cttataaatggtttgaatccaagtattgtaagggacagagtttcatttgagcatttaacc
cctctttttcctgaggaaaaatttaatttagctgaaaagggaagtaatttatcaacgcgt
atcattgatttattttcacctatcggaaaaggacaacgcggaatgctggttgcacaacca
aaaacgggtaagaccattttattaaaagatattgccaatgcgatttctgcgaatcatccc
gaggtttatcagattgtacttttaattgacgaacgtcccgaggaagtaactgatatgcaa
cgcaatgtaactggtgaagttattgcatctacttttgatgaatcggcagaaaaacacgta
agagttgcaaatatagttttggaaaaagccaaaagattagttgagtgtggacatgacgta
gttatccttctcgactctataacaagactggcaagggcctacaatactgttgcacctgct
tcaggaaaaatcctttccggtggtattgacgctaacgcccttcacaaacccaaaagattt
tttggggcagctcgaaatattgaaaatggtgggtcactgtcgattattgcaacagctttg
acggaaacaggatcgaaaatggatgaagtgatctttgaggaatttaaaggtacgggtaac
atggaactgcaattggatcgaaatatttcaaacagaagaatctaccctgcgattgatctt
gttaaatcaagtacccgtagggatgatcttctgcatgaagagaaggtcagacaaagaatc
tgggtgctcagaaaatatcttgctgatatgaaccctatcgaagccatggagttcgtaaaa
gataaaattaagttcacaaataataacgaagaatttttaatgtcaatgaacggctaa
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