Lutimonas zeaxanthinifaciens: QZH61_11850
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Entry
QZH61_11850 CDS
T09226
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
luy
Lutimonas zeaxanthinifaciens
Brite
KEGG Orthology (KO) [BR:
luy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
luy03032
]
QZH61_11850 (topA)
03400 DNA repair and recombination proteins [BR:
luy03400
]
QZH61_11850 (topA)
Enzymes [BR:
luy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QZH61_11850 (topA)
DNA replication proteins [BR:
luy03032
]
Prokaryotic type
DNA Topoisomerases
QZH61_11850 (topA)
DNA repair and recombination proteins [BR:
luy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QZH61_11850 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_Crpt
Motif
Other DBs
NCBI-ProteinID:
WKK65273
LinkDB
All DBs
Position
complement(2635171..2637657)
Genome browser
AA seq
828 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEKFLGKDYVVESSFGHIADLPSKELGVNVDGDFKPNYTVSTDK
KAVVKKLKSLAKKADTVWLASDEDREGEAIAWHLFEQLKLKDESTKRIVFHEITKKAILK
AIENPRSINYNLVNAQQARRVLDRLVGYELSPVLWKKVKGGLSAGRVQSVAVRLIVERER
EIENFVPEASYRVVGEFINKNGKKFKAKLPKNFKTREKAESFLESCKGASFSIDELSTKP
AKKSPAAPFTTSTLQQEASRKLYFPVAKTMVVAQRLYEAGLITYMRTDSVNLSDDAKNAA
REEIVSSYGESFSSPRDFTTKSKGAQEAHEAIRPTNMSTKSVQVESDQARLYELIWKRTL
ASQMSDAQLERTNVRIANDNNQEIFTANGEVITFEGFLKVYLEGDDSEEEDQAGMLPKLT
VNEVLENSYINATERYTKAPYRYTEASLVRKLEELGIGRPSTYAPTISTIQRREYVIKGT
VEGKDRKYTEISLSNEEISVRTLTEKVGADKGKMVPTDIGKIVNDFLVENFSSIMEFGFT
ADVEKEFDEIADGKENWTQMIKDFYSTFHDSVEHVSENADRAKGERLLGVDPESGKNVYA
RLGRFGAMVQIGEATDEEKPKFASLQGEQTLGTITFEEAMDLFRLPKTLGQYEGEEVVVA
NGRFGPYVRFGKSFVSLAKDENPMSVSLDRAIELIEEKRHADAPIAEYENLPVQKGVGRF
GPFIKWNGMFINVNRKYDFDNLSYSDIVELIEAKKQKEIEKVVHNWEEEGIRVEKARWGR
HNVLKGKIKIELPKTVDAQALTLDEVKDIIEKQAPKKTVRKKRTAKKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaatttagtcattgtagagtcacctgccaaagccaaaaccattgaaaaattt
ttaggaaaagattatgtggtagaatccagttttggccatattgcagatttaccttcaaag
gagctgggggttaatgtagacggggattttaaaccaaattatacagtctctacggataag
aaagctgtggttaaaaaattaaaatctctcgctaagaaagcggatactgtctggttagcc
agtgatgaggaccgtgaaggggaggctattgcatggcacttgtttgagcagttgaaacta
aaggatgaaagcacaaaaagaattgtttttcatgagataacaaaaaaggcgatccttaaa
gcaattgagaatccaagaagcataaattacaatcttgtcaatgctcagcaggcaaggagg
gttcttgaccgattagtaggatacgagctttccccggtattatggaagaaagtaaaagga
ggcttgtccgcgggacgggttcagtcggtagctgtaaggcttattgttgagcgagaaaga
gaaatcgagaattttgttccggaagcatcttaccgggtcgttggtgaatttatcaataaa
aacggtaagaagtttaaggcgaaacttcccaagaattttaaaaccagagaaaaggcggaa
tcttttctggaatcatgtaaaggcgcatcattctcaatcgatgagctctcaacaaagccg
gcaaaaaaatctcctgcggctccatttactacttctaccttgcaacaggaagcatccaga
aaattatattttcccgtggccaagacgatggtggtggctcaaaggctatatgaagcgggt
ctgatcacctatatgagaactgacagtgtaaacctgtcggatgatgctaaaaatgcggcc
cgtgaagaaatagtttcatcctatggggaatcattcagcagtccccgagattttaccaca
aagtcaaaaggggcacaagaggctcatgaggcaatcaggccaaccaatatgagtacgaaa
agtgtacaggtggagagtgatcaggcaagattatatgaactgatctggaaacgtaccctt
gcttctcagatgagcgatgcacaactcgaacgaaccaatgttagaattgccaacgacaac
aatcaggaaatttttaccgccaatggtgaagtaataacttttgaaggttttctcaaggtt
tatctcgagggagacgactctgaagaggaagatcaggcaggcatgttgcccaaacttact
gtaaatgaagtattggagaactcctacattaatgctactgaaagatataccaaagcacct
tatagatatacggaagcatcccttgtaagaaaactggaggaacttggaataggcagacca
tcgacctatgcgcctaccatctccacgattcaaagaagagaatatgtgattaagggaact
gtagaaggtaaagaccgaaagtacacggagatttcactttctaatgaagagatcagtgtc
aggacccttactgaaaaggttggggcagataaagggaaaatggtccccaccgatatcggt
aaaattgttaatgactttctggtcgagaatttttcatcgatcatggagtttggttttacg
gcagatgtagaaaaggagtttgacgaaattgcggacggtaaagaaaactggacacagatg
atcaaggatttctacagtacgtttcatgattcggtagagcatgtttcagaaaatgctgat
cgtgccaaaggagaaagacttttaggggtcgatccggaatctggtaaaaatgtttatgcg
cgtctcggacgatttggtgccatggtacaaataggagaggcaacggatgaagaaaaacca
aaatttgcaagcttacagggagagcagactttaggtacgataacttttgaagaggcgatg
gatttgttcaggttaccaaagactttaggtcagtatgaaggtgaagaagtggttgttgcc
aatggccgttttggtccatatgtgagatttggaaaatcatttgtttcattggccaaggat
gaaaaccccatgtcggtctcacttgacagagcaattgaactgattgaagagaagcgacac
gcggatgcaccgattgcagaatatgaaaatctgcctgtacaaaaaggggttggtagattt
ggcccgtttataaaatggaacggcatgtttatcaatgtcaacaggaaatatgattttgat
aatctttcttattcagatatagtggagcttatcgaggccaaaaagcagaaagaaattgaa
aaggtagttcacaattgggaagaagaaggaatccgagttgaaaaagcaaggtggggcagg
cacaatgttttaaaagggaaaattaaaatagaattgccaaaaacggttgatgcacaggct
cttactttggatgaggtgaaggatattattgagaaacaggcacccaaaaaaacagtacga
aaaaagcgaacggcaaaaaagaaatag
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