Limosilactobacillus vaginalis: LV515_03290
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Entry
LV515_03290 CDS
T06850
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lva
Limosilactobacillus vaginalis
Brite
KEGG Orthology (KO) [BR:
lva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lva03016
]
LV515_03290 (rnz)
Enzymes [BR:
lva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LV515_03290 (rnz)
Transfer RNA biogenesis [BR:
lva03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LV515_03290 (rnz)
Prokaryotic type
LV515_03290 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QFS33977
LinkDB
All DBs
Position
685983..686912
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AA seq
309 aa
AA seq
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MQLEFLGTGAGSPSKQRNVTSVALKLLEELNEIWLFDAGEATQHQILHTTIRPRKVTKIF
ITHLHGDHIFGLPGFLSSRSFQGGNEPLTIYGPVGIKKFVMTALQVSESRLSYPLKFVEI
DHSQELFNERGFKVTTMSLDHKIACYGYRIEEADHPGELQVDKLRQDNIPSGPIYGQLKA
GKTVKLDDGRVIDGKNYIGKPQPGRIIAILGDTRQTPNAVVLAHKADVLVHESTFAKNEA
KMAHNYYHSTSLQAAEVAKQAGVKKLLLTHISARYTGKAAYQLAYQVRDVVPDTRVVNDF
DVIDVPFKK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaatttttaggaactggagccggctcaccaagtaagcagcgaaacgttact
agtgttgccttgaaattattagaagagttaaatgaaatttggttatttgatgcaggtgaa
gcaacccaacaccaaattcttcacacgacgattcgcccaagaaaggtaacaaagatcttt
atcacccaccttcacggcgaccatatttttggcttaccaggattcttaagttcacggtca
tttcaggggggaaatgagccgttaacaatttatggaccggtgggaattaaaaagtttgtg
atgacggcccttcaggtgagtgaatcacgactaagttatcctctgaaattcgttgagatt
gatcatagtcaagaattatttaacgaacgcggctttaaagtaacaacaatgtcacttgac
cataagattgcttgttacggctaccggattgaagaggctgatcatcctggtgagctgcaa
gtagataagctacgtcaagataatattccttctgggccaatctacggtcaattaaaagct
ggaaagacagttaagcttgacgacggtagagtaattgatgggaagaactatattggaaag
ccgcaaccagggcgaattatcgcaattcttggcgacacacggcaaacgcctaacgcggta
gtccttgctcataaagcggacgtcctcgtgcatgaaagtacgtttgctaaaaatgaagcc
aaaatggctcacaattactatcactcaacgagtctccaagcggcagaggttgctaagcag
gcaggtgtaaagaagttattgctgacccatatttcagcacggtatacgggaaaagcagca
tatcagttagcataccaggttcgtgatgtcgtaccagacactagagtagtaaatgacttt
gatgtgattgacgttccatttaagaaataa
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