KEGG   Limosilactobacillus vaginalis: LV515_03330
Entry
LV515_03330       CDS       T06850                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lva  Limosilactobacillus vaginalis
Brite
KEGG Orthology (KO) [BR:lva00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lva02048]
    LV515_03330
Enzymes [BR:lva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LV515_03330
Prokaryotic defense system [BR:lva02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LV515_03330
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N DEAD Cystatin DUF2660
Other DBs
NCBI-ProteinID: QFS33984
LinkDB
Position
694304..697417
AA seq 1037 aa
MTVEHKELEFENKLINHLVNLGGSKQWEYRPEIKTTPQLWDNFKQILERNNQDRLEQPLS
DNEFNQVKSIISKLNTPYEAGQFLYGINGISQVEIDRDDGKHVYLTIFDQDQIGAGNTVY
QIVNQIERPAVIPGRKERRFDITLLINGLPIIQIEEKADGHRVSEALNQMHQYIDEEQYT
DIFSTLQILVAMTPHDARYMANTTSDKFNTDFAFEWQRANDNKIVSDAYEFANSMLSIPI
AHQMATNYMILDGTPHHQMIKIMRPYQMYATKRVIEKIRNHQFGYEDQRIGYVWHTTGSG
KTISSFKAAWLASRLPNVNKVVFMVDRVALTNQTVDEYKAYDPENTEDSNGGVVTDTANR
WALSHKLRKKGKGIIVTSTQKMDAMVRNKDFKPVDQNIVFIVDEAHRSTSGDMLKRIKEA
FPKSAWVGYTGTPVFPDKNGKSNGPTTQEIFGDVIHIYTIQDAIKDGNVLGFKVDFRTTL
TDQVMKDEYLPKYFQYRYPKMSAEDIQDRINNLHDEDMDDMIEPSVYDENQQHVKKVVQD
IIEHWDRRSVHGKYNAILTTHVGGGRPSTPMAMMYYREFKRQNKNAAHPLRVGITFSWDT
SNSNGQLDTNNSLREAITDYNQMFGTSFDDNSVKEYTEQVVSRLNGTIDDGKYFDIVIVV
DQLLTGFNAPQLNTLYVDRTLRGSALIQAYSRTNRVYDNQTKPYGRIVNYRWPVHTEKLM
DDALEEYANRQSANIQLKIDDINDDSGILAPSFGKVKKKLHQIVDRLANFTDDFKEIPAS
ENERGQMLQDLRQYNHWMALAKQDDLYDEKKPEKLLKELGMSIDDEEMLTTTLSNQLKDK
IVADRKLLDVSQINLQMERVKEVKVNWDYLEELIAEVLNKYHDQDIEGAKKSAQQVQEIS
DQLEDRSYADKIKRFIKSIFKNKVKSYNYPVKQNHIHSLIDKNNENNMRSEIFDYKKKWG
LADIEDAQLVNKIIENHVVGADDLNSAGELDSIVREAQAVYKTDAEADEVKKLSRFKYRT
HLRRNMMEFADKLKKDY
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgacagtagaacataaagaattagaatttgaaaataagttaattaatcatttagttaat
ctaggtggtagtaaacaatgggagtatcgtcctgaaataaaaactactccacaactttgg
gataacttcaaacagattttagaacggaataaccaagatcgattagaacaaccattatct
gataatgaatttaatcaagtaaagtccattattagcaaacttaatacaccatatgaagct
ggacaatttttatatgggatcaatggtatctcacaggtagaaatagatcgggatgatgga
aagcatgtttatttaaccatatttgatcaagatcaaattggggctgggaatactgtttac
caaattgtgaatcagattgaaaggccagcagttattccaggacgaaaagaaagacgtttt
gacataacgctacttattaatggattgccaattattcaaattgaagaaaaagcagatggt
caccgcgtgtcagaagcattaaaccagatgcatcaatatatagatgaagaacaatacacg
gatattttttctactttacagatcttagttgctatgacacctcatgacgctcgttatatg
gctaatacgacttctgacaagtttaatactgactttgctttcgaatggcaacgagctaat
gataataaaattgtttcggatgcctatgaatttgctaatagtatgctatcaattccaata
gcacatcaaatggcaactaattatatgatcttggatggtactccacatcatcagatgatt
aaaattatgcgtccatatcaaatgtatgcaactaaaagagtgattgaaaaaattcgtaat
catcaatttggatacgaggatcaacgaataggttatgtttggcatactactggttctggg
aaaacaattagttcatttaaggctgcttggttagcttcgcgattaccaaacgtcaataaa
gttgtttttatggttgaccgagtagcattaacaaatcaaacagtagacgaatacaaggcg
tacgatccagaaaatactgaggacagtaatggcggagttgttacagacactgctaatcgc
tgggctttatcacataagttaaggaaaaaaggtaagggaattattgttacatcgactcaa
aagatggatgcaatggtgcgcaataaagactttaaaccagttgatcaaaatattgttttt
attgttgacgaggctcatcgttcaacatctggtgatatgttaaagcggataaaggaagct
tttccaaaatcggcgtgggttggttacacaggtactccagtatttccagataagaatgga
aagagtaatggaccaacaactcaagagatttttggtgatgttattcatatttacactatt
caagatgcaattaaagatggcaatgttcttggctttaaagttgactttaggacaactttg
actgaccaagttatgaaagacgagtacttacctaaatatttccaatatcgttatccaaaa
atgtctgctgaagatattcaagatagaattaataacttacatgatgaagatatggatgac
atgattgaaccgagtgtttatgatgaaaatcagcaacacgttaaaaaagtcgttcaagac
attattgaacactgggatcgtcggtcagttcatggaaaatataatgctattttaaccacg
catgtgggtggtggaaggccatcgactccaatggcaatgatgtattatcgtgagtttaaa
cgtcaaaataaaaatgcagctcatccgcttagggttggaattacttttagttgggatacc
tcaaatagcaatgggcaattagatacaaacaattcattaagagaggcaattactgattat
aatcaaatgtttggaactagttttgatgataattccgttaaagaatatacagaacaagta
gtttcgcggttaaacggaacaattgatgatggtaagtattttgatattgtaattgttgtc
gatcagttattaaccggctttaatgccccacaactaaatacattatacgttgaccggaca
ttacgaggttctgcgttaattcaagcatattctcgtactaatcgggtttatgataatcag
actaagccatatggacgaattgttaattatcgctggccagtccatacggaaaaactaatg
gatgatgctttggaagaatatgctaatcgtcaatcagcaaacattcaattaaaaattgat
gatattaatgacgattcgggaatccttgcccctagttttggaaaggtaaagaagaaactt
catcagatagtagatcgacttgctaattttactgatgacttcaaggagataccggctagt
gagaacgaacgtggacagatgcttcaagatcttcggcagtataaccattggatggcatta
gccaagcaagatgatctttatgatgaaaagaaaccagagaaattactgaaagaattaggg
atgtcgattgatgatgaagaaatgttaacaacaactttatctaaccagttaaaggataaa
attgttgctgatcgaaaactactcgatgtttctcagattaacctacagatggaaagagtc
aaagaggttaaggtcaattgggattaccttgaagaattgattgctgaagtccttaataaa
tatcatgatcaagacattgaaggagcaaagaaatctgctcaacaagttcaagagatttcg
gatcaattagaagatcgttcttatgctgataagattaaacgatttattaaaagcattttt
aagaataaggttaagtcatataactatccggttaagcagaatcatattcatagtttgatt
gataaaaacaatgaaaataacatgcgttcagagatctttgattataagaaaaaatgggga
ttggctgatattgaagatgcccaacttgtaaataagattattgaaaatcatgttgttggt
gctgatgacctaaattctgctggagaactagatagcattgttcgggaagcacaggcagtt
tataaaacggatgcagaagcagatgaagttaaaaaactaagccggttcaaatatcggacg
catttacgcagaaatatgatggaatttgcagataaattaaagaaagattactag

DBGET integrated database retrieval system