Limosilactobacillus vaginalis: LV515_03555
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Entry
LV515_03555 CDS
T06850
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lva
Limosilactobacillus vaginalis
Brite
KEGG Orthology (KO) [BR:
lva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lva03016
]
LV515_03555 (truB)
Enzymes [BR:
lva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LV515_03555 (truB)
Transfer RNA biogenesis [BR:
lva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LV515_03555 (truB)
Prokaryotic type
LV515_03555 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QFS34027
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All DBs
Position
742207..743106
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AA seq
299 aa
AA seq
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MDGIIPLYKERGMTSFDCVSRLRRILKTKKIGHSGTLDPSVDGVLPICIGNATKVVEYLM
QSGKEYQGELVIGKATTTEDFDGEIVETKPVETPISSELIKEAMQKMTGEIIQIPPMYSA
VKVNGKRLYEYARTGETVERPRRKALISSFALCRNEYDSEHQEQHVYFKVKCSKGTYIRT
LVADLARSLGYPGAMKWLTRLESGGFTLDQTLSLNDIQDAVAHQKINRHLYPIDYALKDY
PAVELTPVQWHSVQHGGWLKKDELQTVANEVVLKYDGSTKALYHLTSQGYKPTKMFSVK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattattcccttgtacaaggaacgtggaatgacgagctttgattgtgtcagt
cgtttgcggcggatactaaagacaaagaaaatcggtcattcagggacgctggatccctct
gttgatggtgttttgccaatctgtattggtaatgcgactaaagtagtagaatacttgatg
cagtcaggtaaagaataccagggagagctagtaatcggaaaagcgacaacgactgaagat
tttgatggtgaaatagttgaaactaaaccagtcgaaactccaattagtagtgaactaatt
aaggaagcaatgcagaaaatgacgggagaaatcattcagattccgccgatgtattctgcc
gtcaaggtgaatggaaagcgtctttatgagtatgcccgtaccggtgaaaccgtggaacga
ccacgacgtaaagcgttgattagtagttttgccctgtgtcgaaacgagtatgattcagaa
catcaagaacaacacgtttattttaaggtaaagtgtagtaaggggacttacattagaacg
cttgtcgctgacttagcgcgttcgcttggctatcctggtgcgatgaaatggctaaccagg
cttgaaagtggtggctttacgcttgaccagaccctgagcttaaatgatattcaagatgcg
gtagctcaccaaaaaattaatcgccatctttatccaattgactatgcattgaaagactat
ccagcagtagaattaactccggtacaatggcattctgttcagcatggtggttggcttaag
aaagatgagctgcagacagtggcaaatgaagtggtcctgaaatatgacggatcgactaaa
gcgctatatcatctaacgtcccaaggatataaaccaacaaagatgttctctgtgaagtga
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