Limosilactobacillus vaginalis: LV515_05185
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Entry
LV515_05185 CDS
T06850
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lva
Limosilactobacillus vaginalis
Pathway
lva03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LV515_05185 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lva03400
]
LV515_05185 (xth)
Enzymes [BR:
lva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LV515_05185 (xth)
DNA repair and recombination proteins [BR:
lva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LV515_05185 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QFS34307
LinkDB
All DBs
Position
complement(1080925..1081752)
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AA seq
275 aa
AA seq
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MKLISWNIDSINAALTGTSTRAEETRSVLHKIAGKHPDVIAIQETKLSKNGPTKKHLAVL
QELFPDYQVAWRSSVEPARKGYAGTMYLYLKEYEPTVTYPQIGAPETMDDEGRIITLEFP
DFFVTEVYTPNSGSGLKRLADRQVWDDCYREYLQKLDQQKPVIASGDFNVAHESIDLAHP
ENNHHSAGFTDEEREHFTKLLAAGFTDSFRHLNPEKTGAYSWWAQRVITSKQNNSGWRID
YWLVSDRLADKIKNSTMIDSGERRDHTPIELDIDL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatttcatggaatattgattcaattaacgcggctttaaccgggacatcaaca
agggctgaagaaacgagaagcgttctccataagatcgcaggtaagcatccggatgtaatt
gcaattcaagaaactaaattatctaaaaatgggccaacaaaaaagcatcttgcggttttg
caggaattgtttcctgactaccaggttgcctggcgaagttcggtagagcctgcacgaaag
gggtatgctggaacaatgtacctctacctaaaggaatatgaaccaacagttacttatccc
caaattggtgcgccagaaaccatggatgatgagggacgaatcattacccttgagttcccc
gactttttcgttaccgaagtttatacacccaattccgggagcgggttgaagcggttagct
gatcgccaagtttgggacgattgctatcgtgaatatttacagaagctcgatcagcaaaag
ccagtgatcgcgagtggtgattttaatgtagctcacgagtcaattgatctagctcatcca
gaaaataaccaccattctgccggctttacagatgaggagcgggaacactttactaaattg
cttgcggctggatttaccgatagtttccgtcaccttaatccagaaaaaacaggtgcctat
tcttggtgggcacaacgggtaatcactagtaagcaaaacaattccggctggagaattgat
tactggctcgttagtgatcggcttgccgataagattaagaattcaacgatgattgattct
ggtgaacggcgtgaccatacaccgattgaattagatattgatctctaa
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