Limosilactobacillus vaginalis: LV515_07465
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Entry
LV515_07465 CDS
T06850
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lva
Limosilactobacillus vaginalis
Pathway
lva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LV515_07465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lva03021
]
LV515_07465
03400 DNA repair and recombination proteins [BR:
lva03400
]
LV515_07465
Enzymes [BR:
lva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LV515_07465
Transcription machinery [BR:
lva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LV515_07465
DNA repair and recombination proteins [BR:
lva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LV515_07465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
SpoIVA_ATPase
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFS34694
LinkDB
All DBs
Position
complement(1501497..1502441)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEFEKPNIHKVEETDSYGKFVVEPLERGYGTTLGNSLRRVLLASLPGAAITSIQIDGVL
HEFSTVEGVTEDVTQIILNLKKVSLKLDSEEQKDLEIDVKGPAEVTAGDIQGDGEVEVLN
PDLYIATVADGAELHIKMTADKGRGYLSANDNKARMDDLAIGVLPIDSIYTPIERVNYTV
ENARVGQRNDYDKLTLDVWTDGSLTPTEAVSLGAKILTEHLAMFVNLTEEAQNAQVMVEK
EETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVKELTDRTEADMMKVRNLGQKSLEEIK
LKLNDLGVSFRQDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaagccaaacattcacaaggttgaagaaactgatagctacggtaag
ttcgttgttgaaccgctcgaacgtggttatggaactacacttggtaattcattaagacga
gttttactagcatcattacctggtgctgccatcactagtattcaaattgatggtgtttta
catgaattcagtactgttgaaggtgttactgaagatgtaactcaaatcattttgaacctg
aagaaagtttctctaaaactggattcagaagaacaaaaggatcttgagattgatgttaaa
ggtcctgctgaagttaccgccggtgatattcaaggcgatggtgaagttgaggttcttaac
cctgacttatacattgctaccgttgcagatggtgccgaactgcacatcaagatgactgct
gacaagggtcgtggttatctttctgcaaatgataacaaagctcgaatggatgatctcgca
attggtgtattgccaattgactccatttataccccgattgaacgtgttaactacacagtt
gaaaatgctcgggttggtcaacgtaatgattacgataagctaaccttagatgtttggact
gatggttcattaacaccgaccgaagctgttagcttgggtgctaagattttaacggaacac
ttggcaatgtttgtcaaccttactgaagaggctcaaaatgcacaagtgatggttgaaaag
gaagaaacccataaagaaaaaatgcttgaaatgacaattgaagaacttgatctttcagtt
cgttcatacaactgtcttaagcgtgcgggtatcaataccgttaaggaattgactgatcgg
accgaagctgacatgatgaaggtacggaacttaggccaaaagtcacttgaagaaattaag
ttgaaattaaacgatctcggcgtttcattccgtcaagatgattaa
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