Lipotes vexillifer (Yangtze River dolphin): 103068286
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Entry
103068286 CDS
T03090
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04136
Autophagy - other
lve04140
Autophagy - animal
lve04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103068286 (ATG16L1)
04136 Autophagy - other
103068286 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103068286 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103068286 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103068286 (ATG16L1)
Membrane trafficking [BR:
lve04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103068286 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
103068286 (ATG16L1)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103068286 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
eIF2A
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
103068286
NCBI-ProteinID:
XP_007445789
UniProt:
A0A340WF50
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSSGLRASVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEMQMNEAKIAECLQTISDLETECLELRTKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPAEQDDDI
EVLVDETSDHAEEASPVRAVSRAAAKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
HPGSSREVRVPTTAMCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAIRQTFSAPGFKCGSDWTRA
VFSPDGSYVAAGSAEGSLYIWSVLSGKAEKVLSEHHGSAINAVAWSPAGSHVVSVDKGSK
AVLWSEY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgcctccgtcttcccccgctggaagcgccacatctcggaggag
ttgaggcggcgggaccggctgcagaggcaggcgttcgaagagatcatcctgcagtataac
aagctgctggaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
cacgacataccaaacaggcatgagataagtcctggacatgatggtgcatggaatgatagt
cagctgcaagaaatggcccagctgaggattaaacaccaagaagaactgactgaattacac
aagaaacgtggggagttagctcagttggtgattgacctgaataaccaaatgcagcagaag
gacaaggagatgcagatgaacgaagccaaaattgcagaatgcttgcagaccatctctgat
ctcgagaccgagtgcctggaactacgcactaagcttcaggaccttgaaagagccaaccag
acgctgaaggatgaatatgatgcccttcagatcactttcactgccctggaggagaaactg
aggaagactactgaggagaaccaggagctggtcaccagatggatggctgagaaagcccag
gaagctaatcgcttaaacgcggagaatgagaaggattcgaggaggcggcaagcccggctg
cagaaggagctcgcagaagcagcaaaggaacctctcccagctgagcaggatgatgacatt
gaagtccttgtggatgaaacctccgatcacgctgaggaggcctctccggtgcgggccgtc
agcagagcagctgctaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggaggcgctctgtgtcttcctttccagttccccaggataacgtggatact
catcctggctctagtagagaagtgagggtgccaacgactgcaatgtgtgtcttcgacgct
catgatggggaggtcaatgctgtgcagttcagcccgggttcccggctcctggccacggga
ggcatggatcggagggtgaagctctgggaagtgttcggagacaaatgtgagttcaagggt
tccctatccggcagtaatgcaggaattacaagcattgaatttgatagtgctggatcttac
ctcttagcagcgtcaaatgatttcgcaagccgcatctggactgtggatgactatcggtta
cggcatacactcacgggacacagtggcaaagtgctgtctgccaagttcctgctggacaat
gcgcgtattgtttctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaa
gtctgcataaagacggtatttgctggatccagctgcaatgatattgtctgcacagagcag
tgtgtgatgagtggacattttgacaagaaaattcgtttctgggacatccgatcagagagt
atcgtccgagagatggagctcttgggaaagattactgccctggacttaaacccagaaaga
actgaactcctcagctgctcccgagatgacctgctaaaaattattgacctacgaataaat
gctatcagacagacattcagcgcgccaggcttcaagtgcggctccgactggacaagagct
gtgttcagccctgacggcagttacgtggcagcaggctcggccgagggctctctctacatc
tggagcgtgctctccgggaaagcggagaaggtcctttcagagcatcacggctcagcgatc
aacgccgtggcctggtcgcctgctggctcccacgtcgtcagcgtggacaaaggaagcaaa
gctgtgctgtggtcagagtactga
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integrated database retrieval system
