Lipotes vexillifer (Yangtze River dolphin): 103069173
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Entry
103069173 CDS
T03090
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03013
Nucleocytoplasmic transport
lve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103069173 (UPF2)
03015 mRNA surveillance pathway
103069173 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103069173 (UPF2)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103069173 (UPF2)
mRNA cycle factors
P-body specific factors
103069173 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
103069173
NCBI-ProteinID:
XP_007452651
UniProt:
A0A340WUI6
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MPAERKKPASMEEKESLLNSKEKDCSERRPVSSREKPKEEIKLTAKKEVIKIPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEERKKQEEQAKRQEKEESLQLH
QEAWERHQLRKELRSRNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSH
DFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEAR
REEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSVIYEQLKNIINADRESHTHVSVVISF
CRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDH
RELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDK
PTPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQ
NKESNKDDYKEAKEPKDNKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQ
EQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIV
PRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIG
ELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQM
MRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKV
LRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLE
DIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLD
PPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPID
IDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKDSMTEGENLEE
DEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEE
NTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLR
KGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMR
MKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGR
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacagc
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaagcttaccgccaagaaggaggttattaagatccctgaagataagaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaagaattaaagaaaaaagaggaagaagaaaaaaagaagcatgaagaagag
agaaagaagcaagaagagcaggcaaaacgtcaagagaaagaggaatcccttcagcttcat
caggaggcttgggaacgacatcagttaaggaaggaacttcgtagcagaaaccaaaatgct
ccagacaaccgaccagaggaaaatttctttagccgactagactcaagtttgaagaaaaat
accgcttttgtcaagaaactaaaaactattacagaacaacagagagactccttgtcccat
gattttaatggcctaaatttaagcaagtacattgcagaggctgtagcttctattgtggaa
gcaaagctaaaaatatctgatgtgaattgtgctgtgcacttatgctctctctttcaccag
cgttacgccgactttgccccatcacttcttcaggtttggaaaaaacattttgaagcaagg
agagaagagaaaacacctaacattaccaagttaagaactgatttgcgtttcattgcagaa
ttgacaatagttgggattttcactgacaaggaaggtctttccgtaatctatgaacagcta
aaaaatattattaatgctgatcgggaatcccatacccacgtttctgtggtgattagtttt
tgtcgacattgtggagatgatattgctggacttgtaccaaggaaagtaaagagtgctgca
gagaagtttaatttgagttttcctcctagtgagataattagtccagagaaacagcaacct
ttccagaatcttttaaaagaatactttacgtctttgaccaaacacctgaaaagggaccac
agggagctacagaatactgagagacaaaacaggcgtattctacattctaaaggggagctg
agtgaagatagacataaacagtatgaggaatttgctatgtcttatcagaagctgctggca
aattctcaatccttagcagaccttttggatgaaaatatgccagatcttcctcaagacaaa
ccaacaccagaagagcatgggcctggaattgatatatttacacctggtaaacctggagat
tatgacttggaaggtggtatatgggaggatgaagatgctcggaatttttatgagaacctc
attgatttgaaagcttttgttccagccatcttgtttaaagataatgaaaaaagttgtcag
aataaagagtccaacaaggatgattacaaagaggcaaaggaacctaaggataataaggag
gtatcaagtcctgatgatttggagcttgagttggagaacctagagattaatgatgacact
ttggagctagagggtggagatgaagctgaagatcttacaaagaaacttcttgatgagcaa
gaacaagaggatgaagaagccagcactggatctcatctcaagctcatagtagatgctttt
ctccagcaattgcccaactgtgtcaaccgtgatctgatagacaaggcagcaatggatttt
tgcatgaacatgaacacaaaagcaaataggaagaagctggtccgggcgctctttatagtt
cccagacaaaggttggatttgctaccattttatgcaagattggttgctacattgcatccc
tgcatgtctgatgtagcagaggatctttgttccatgctgaggggggatttcagatttcat
gtacgaaaaaaggaccagatcaacattgaaacaaagaacaaaactgttcgttttattgga
gaactcactaagtttaagatgttcacaaaaaatgatacactgcattgtttgaagatgctt
ctatcagacttttcccatcaccatattgaaatggcatgtaccctactagaaacatgtgga
agatttcttttcagatctccagaatctcacctgaggaccagtgtacttttggaacaaatg
atgagaaagaaacaagcgatgcatctcgatgcaagatatgtcacaatggtggagaatgca
tattactactgcaacccacctccagctgaaaaaacagtgaaaaagaaacgtcctcctctc
caggaatatgtccggaaacttttgtacaaggatctctccaaggttaccactgagaaggtt
ttgagacagatgcgaaagttgccttggcaggaccaagaagtgaaagactatgtgatttgt
tgtatgataaacatctggaatgtgaaatataacagcattcattgtgtagccaacctcttg
gcaggactagtgctctaccaggaggatgttggaatccatgttgtggatggagttttagaa
gatattcgattaggaatggaggttaatcaacctaaatttaatcagagacgtatcagcagt
gccaagttcttaggggaactttataattaccgaatggtggaatctgctgttatttttaga
actctttattcttttacttcatttggtgttaaccctgatggctctccaagttcactggac
cctcccgagcaccttttcaggattagactagtgtgcactattttggatacctgtggccag
tactttgacagaggttctagtaaacgaaaactcgattgcttccttgtgtattttcagcgt
tatgtttggtggaagaaaagtttggaggtttggacaaaagaccatccatttcctattgac
atagattacatgatcagtgacacactagaactgctaagaccaaagatcaaactctgtaat
tctctggaagaatccatcaggcaggtacacgacttggaacgagaattcttaataaaacta
ggcctagtaaatgacaaagactcaaaagattctatgacagaaggagaaaatcttgaagaa
gatgaagaagaagaagaaggaggagctgaaacagaggaacaatctggaaatgaaagtgaa
gtgaatgagccagaggaagaggagggttctgataatgacgacgatgaaggggaggaagaa
gaggaagagaatacagattacctcacggattcaaataaggagaatgaaactgatgaagaa
aatactgaggtaatgattaaaggaggtggactcaaacatgtaccttgtgtagaagatgag
gacttcattcaagctctggataaaatgatgctagaaaatcttcagcaacgaagtggcgaa
tctgttaaagtgcaccaacttgatgttgccattcccttgcatctcaaaagccagctgagg
aaagggcccccactcggtggtggggagggagaaacagagtctgcagatacgatgccgttt
gtcatgttaaccagaaaaggcaataaacagcagtttaagatccttaatgtacccatgtct
tcccaacttgctgcaaatcattggaaccagcaacaggcagaacaggaagagaggatgaga
atgaaaaagctcacactagatatcaatgaacggcaagaacaagaagattatcaagaaatg
ctgcagtctcttgcccagcgcccggctccagcaaacaccaatcgggagcggcggcctcgt
taccaacatccaaagggagcgcctaatgcagatctaatctttaagactggtgggaggtag
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