Lipotes vexillifer (Yangtze River dolphin): 103069608
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Entry
103069608 CDS
T03090
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103069608 (ZSWIM8)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
103069608 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
103069608
NCBI-ProteinID:
XP_007467571
UniProt:
A0A340Y1P6
LinkDB
All DBs
Position
Unknown
AA seq
1894 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCVQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSATDRKLALCWARALPPRPGASRSGGLEESRERPRPLPAEPAV
RPKEPGAKRKGLGEGVLSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGGKGSAG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPHPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPSTASAGPPGLLPRELCTRDDLASTDESGNGLPKTKEAAP
AVGEEEDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEILFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSEHPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVATLLKKIPLGPSEMS
TVRCRAEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSASGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLPEGRGVPGTEPVTVAAAAAAVTAATVVPVISVGSSLYPG
PGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHP
AFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVALSSVHPASTFP
AIQGASLPALPTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRA
HNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPRSCPQPPACPGLPPTGAALP
AGIHAVHPPPLDSPDPCRLRRLCECDPQCSQRLLPDTHGHDAVQRHPAESQAQQTDQGAV
AAGLTRDDHLLPLSLAPLGPYTGTQACGYGDPSQRGNESWLDRSSPLSSLVAQTGSCSWG
QDVSDPRSLGLGETALSGRGRWVASGIYLAFINI
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgcggagtgggaggacggagagcgcttctctttcgaggattcggac
cgctttgaggaggattcactctgttctttcatctccgaggccgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccgctggtggagctgtca
gcaaaacaggtggcgtttcatataccatttgaagtggtggagaaagtttaccccccggtg
cctgagcagctccaactccgaattgctttttggagcttccctgagaatgaagaggatatt
cgactgtattcctgcctggccaacggcagtgcagatgagttccagcgaggggatcagcta
ttccgcatgagggctgtgaaggaccccctgcagattgggttccacctgagtgctacagtg
gtgccacctcagatggtcccccccaaaggggcctacaacgtggctgtgatgtttgaccgc
tgccgggtcacttcctgcagctgcacctgtggggctggggccaaatggtgcacccacgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgcctgcgggccccagtg
tcagagtccctgtctcgactgcagagggaccagctgcagaagtttgctcagtacctcatc
agtgagctccctcagcagatcctgcccacagcccagcgtctcctggatgaactcctctcc
tcccagtcaacagccatcaatacagtatgtggagccccggaccccacagcagggccctct
gcctccgatcagagtacttggtatttggatgaatcaacactcactgacaacatcaagaag
acactgcacaagttctgtggcccctcccctgtggtgttcagtgatgtgaactccatgtat
ctgtcttccacggagcctccggccgctgctgaatgggcatgtctgctgcgcccactgagg
ggccgcgagccagagggagtctggaacttgcttagcatcgtgcgggagatgttcaagcgg
agggacagcaatgctgcccccttgttggaaatcctcaccgaccagtgcctcacctacgaa
cagataacaggctggtggtacagcgtgcgcacctcagcctcacacagcagcgccagtggg
cacacaggccgcagcaacgggcagtcagaggtggcggcccatgcatgcgccagcatgtgt
gacgagatggtcacactgtggaggctggctgtgctggaccctgcgctcagcccccagcgg
cgccgggagctgtgtgtgcagctgcgccagtggcagctgaaggtgattgagaacgtgaag
cggggacagcacaagaagaccctggagcggctcttccctggcttccggccggcggtggag
gcctgctacttcaactgggaagaggcctacccccttcccggtgtcacctacagtgccact
gacaggaagctggccctgtgctgggcccgagccctgccccctcggccaggtgcctcccga
tctgggggcctggaagaatcccgggagcggccccgccctcttcctgccgagccagctgtg
cggcccaaggagcctggggccaagcgcaagggattgggtgagggggtcctctcatcgcag
cggggtccccgccgcctctcggctgaggggggagataaggctctgcataagatgggtcca
ggtgggggcaaagccaaagcattggggggggctggcagtgggggcaagggctcagcaggc
agcgggagcaagcgacggctgagcagtgaagacagctccctggagccggatctggctgag
atgagcctggatgatagcagcctggccctgggtgcagaggccagcacctttggtggattc
ccggagagcccaccaccctgccctcatcctggtggctcccgaggcccttctaccttcctt
cctgaacctccagatacttatgaagaagatggtggcgtgtacttctcagaagggcctgag
ccttccacagcctctgctggcccccctggcctactgcccagggagctctgtacccgggac
gacctcgcttccacagatgagagtggcaatgggctccctaaaaccaaagaggcagcccct
gcggttggagaggaggaggatgactaccaggcgtattatctgaatgctcaggatggcgct
gggggcgaggaagagaaggctgagggcggggctggggaggaacacgacctgtttgctgga
ctgaagccactggaacaggagagccgcatggagatattatttgcctgtgctgaggccttg
catgcacatggctatagcagtgaggcctcccgcctcaccgtggagcttgcccaggacttg
ctagccaacccacctgacctcaaggtagagccgccccctgccaagggcaagaagaacaag
gtatctacaagccgtcagacctgggtagctaccaacaccctgaccaaggcggccttcctg
ttaacagtgctaagtgagcacccagagcaccacaacctggccttccgagtgggcatgttt
gccttggagctacagcggcccccagcttccaccaaggccttggaggtgaagctggcatat
caggagtctgaggtggccaccctgctcaagaagattcctctgggtccgagtgagatgagt
actgtgcgctgccgggcagaggagcttcgggaggggacactctgtgattatcggcctgtt
ttgcctctcatgttggccagtttcatctttgatgttctctgtactccagtggtttctccc
acgggttcccggcccccaagtcgcaactggaacaacgagatgcctggggatgaggagctg
ggatttgaagcagcagttgctgccttgggcatgaagacaacagtgagtgaggcagagcat
cccctgctatgtgaaggcacacgtcgggagaagggtgacctggccctggcactaatgatc
acttacaaagacgaccaggccaaactcaaaaagatcttagacaaactcttggaccgagag
agccagacgcataaaccacagacactgagttcgttctactcatctagccgcccagccaca
gccagccagaggtctccttcaaagcatgggggcccatctgcttcaggggccctgcaacct
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggtctcccatctgaggcagctttgaccccaagaccagagggaaaggttcccagccgcttg
gcacttggcagccgtggaggctacaatggacggggctggggctcaccagggcggcctaag
aagaagcacacaggcatggccagcattgatagcagtgcccctgaaacgacgtcggatagc
tccccaaccttaagccggaggccacttcgagggggctgggcccctacctcttggggccga
ggacaggacagtgacagcattagcagctcttcctcagactcccttggctcctcgtcctcc
agcggaagtcgccgggccagtgccagtggaggggcccgggcgaagacagttgaagttggc
aggtacaagggccgccgtcctgagagtcatgccccccatgtacccaatcagccgtcagag
gcagctgcacacttctacttcgagctggcgaagacggtgctgatcaaggcagggggcaac
agcagcacttccattttcacacatccatcttcctcagggggccaccagggtcctcaccgt
aacctgcacctttgcgccttcgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttactcttcccacgtttcctggattacaggccaggca
atggagattggcagcgcagccctgactatactggtagaatgctgggatgggcacctgaca
ccccctgaggttgcatccctggctgacagggcatcacgggcacgagactccaacatggtg
agggcagcggcagaactagccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggcggctaagggtgggggcgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcaggggggtcccagggactgagccggttacagtggcggcggcggcagca
gcagtgacagcagccacagtggtgccagtcatctcggtggggtccagtttatatccgggt
ccaggactggggcacggtcattcccctggcctgcacccctacactgctctacagccccac
ctgccctgcagccctcaatacctcacccacccagctcaccctgcccaccccatgcctcat
atgccccggcctgccgtcttccctgtgcccagctctgcatacccacagggtgtgcatcct
gcattcctgggggctcagtacccttactcggtgactcccccctcacttgccgccactgct
gtgtctttccccgtcccttccatggcacccatcacagtacatccctaccacacagagcca
gggctcccactgcccaccagtgtggccttgagcagtgtccatccagcttccacgtttccg
gccatccagggtgcctcactgcctgccctgcccacacagcccagccctctggtgagcggg
ggttttccaccacccgaggaggagactcacagtcagcctgtcaacccgcacagcctacac
cacctgcacgccgcctaccgtgtcgggatgctggcactggagatgctgggtcgccgggca
cacaatgatcaccccaacaacttctcccgctcccccccctacactgatgatgtcaaatgg
ttgctggggctggcagcaaagctgggagatcgtcatggagacgctgcagcggctgagccc
cgctcatgcccacaaccacctgcgtgccccggccttccaccaactggtgcagcgctgcca
gcaggcatacatgcagtacatccaccaccgcttgattcacctgacccctgccgactacga
cgactttgtgaatgcgatccgcagtgctcgcagcgccttctgcctgacacccatgggcat
gatgcagttcaacgacatcctgcagaatctcaagcgcagcaaacagaccaaggagctgtg
gcagcgggtctcactcgagatgaccaccttctccccctgagtctggcccccctagggccc
tatacagggacacaggcctgtggctatggggacccctcacaaagggggaatgaatcttgg
ctggacagatcatccccactcagttccctggtagcccagactggcagctgttcttggggc
caagatgtctcagaccctagaagcctagggttgggggagacagccctgtctgggaggggg
cgttgggtggcctctggtatttatttggcatttataaatatataa
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