Lipotes vexillifer (Yangtze River dolphin): 103069639
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Entry
103069639 CDS
T03090
Symbol
LIMCH1
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lve04990
]
103069639 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
lve04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
103069639 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
103069639
NCBI-ProteinID:
XP_007453104
UniProt:
A0A340X193
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MACAALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCASYSGTTLNLKEFEGLLAQMRKETDDVESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKXXXX
STATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAKVQPHSRARQEQLQLINNQLR
EEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQE
KERRERELHEAYKNARSQEEAERILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSS
FLNDPNPMKYLRQQSLSPPKFTATVETTIARTSVLDASMSAGSGSPSKTVTPKAVPMLTP
KPYSQPKNSQEVLKTFKVDGKVTMNGETVHVDQEEKERECPPVALAPSLTKSQTFEGVAR
VHGSPMELKQDNSSIEMNIKKPSSLPQELTATTEETETNSQEDENDGENTEKGNTEVASS
EPQYFTSTVTRSSPTVAFVELSSSPQVKNEVPEEKDQKKRENEMSGKVELVLSQKVVKPK
SPEPEATLTFPFLDKMPESSQLPLPNLSSQVDSPSSEKSPVTTPLKLWAWDPEEERRRQE
KWQQEQERLLQERYRKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSTS
ADQLSTSSSVTEGSGTMNKMDLENCREEEQKTRPKKPFQGDNSGSLLKTKEGDPLEEKGS
LTQGVLTHSENPALKGIYQDLQLVTEAGASPCGMNPQLAQDPSRNQQVSNPPMHILEDVK
PKTLPLDKSINHQIESPSERRKSISGKKLCSSCGLPLGKGAAMIIETLNLYFHIQCFRCG
ICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgccgctctcggtctggaagctcttcagcccttgcagccggagccgcccccc
gagcccgccttctccgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacagggttagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aatatcatattattcttgagaggttgtaaagagcttggccttaaagaatctcaacttttt
gacccgagtgacctacaggatacgtccaacagagtaacagtcaagagccttgattatagc
aggaagctgaaaaatgtactagtgactatttactggctgggcaaagcagcaaatagctgt
gcatcttacagtgggacaacgctaaacctgaaggagtttgaaggcttgctggctcagatg
aggaaggagactgatgacgttgagagccctaaacgtagtattcgagacagtggctacatc
gactgctgggactctgagcgcagcgactccctctctccccctcgacacggcagagatgat
tccttcgatagcctggattcctttggctcccgttcccggcagacaccttcgccagatgta
gtcctcaggggaagcagtgatgggagaggaagcgactctgaatccgacttgccccatcgg
aagctgccggatgtgaaaaaggatgacatgtctgcgaggcggacttcccacggtgagccc
aaatcagcagtgccttttaaccagtacctccccaacaaaagcaaccagacagcctacgtc
ccggcacccctgagaaagaagaaagcagagcgagaggaatatcggaagnnnnnnnnnngg
agtactgccacctcccccctgggcggggagaggcccttcagatacggaccgagaactcct
gtgtctgatgacgcagagagcacgagtatgttcgacatgcggtgtgaggaggaggccaag
gtgcagccgcacagcagggcccgccaggagcagctgcagctgataaacaaccagctgcgg
gaagaggatgacaaatggcaagatgacctggctcgttggaagagccggagaagaagtgct
tctcaggacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactggctgga
gaggatgggacaagtgaacgaaggaaaagcatcaaaacctacagggagattgtccaggaa
aaggagcggagagagagggagttgcatgaggcatacaagaatgcacggtcccaggaggag
gcggaaaggatccttcagcagtacatcgagaggttcaccatcagcgaagctgttcttgaa
cgcttggagatgccaaaaattctggaaagaagccattcaacagagccaaacttatcctcc
ttcctgaatgaccccaaccccatgaaatacctgcggcaacagtcactgtctccgcccaaa
ttcactgccaccgtggaaaccaccatcgctcgtaccagtgtactggatgccagcatgtca
gcaggcagtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacaccc
aagccttactcccagcccaaaaactctcaagaggtcctgaagaccttcaaggtagatggg
aaagtcaccatgaatggagagacggttcacgttgaccaggaggagaaggagagagagtgt
ccccccgtggcacttgccccctcgttgaccaaatcccagacgtttgaaggtgtggccaga
gtgcatgggtcccccatggagctgaaacaagacaacagtagcattgagatgaacataaag
aagccaagttctcttccccaagagctgacggcaaccactgaagaaactgaaaccaacagt
caagaagatgagaatgatggtgaaaatacagaaaaagggaatacagaagttgcctcatca
gagccacagtattttacatcaactgtgactcgatccagcccgaccgtggcctttgtggag
ctttcctccagcccccaggtgaagaacgaggtgccggaagagaaagaccagaagaaacgg
gaaaatgaaatgagtggaaaggtggaactggtgctgtcacaaaaggtggtaaagccaaaa
tctccagaaccagaagcaaccctgacgtttccatttctggacaaaatgcctgaaagcagc
caattacctttgccaaatctcagttctcaagtggattctccaagcagtgaaaagtcacct
gtaactacgcctttgaagttgtgggcttgggacccggaagaggaacgcaggcgacaggaa
aaatggcaacaggagcaggaacgtttgctccaggagagataccggaaggaacaggacaag
ctgaaggaagagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatactat
gaggaggagcgcaaaataattgaggacactgtggttccatttactatttcttcaacttct
gcagaccagctgtctacatcctcctctgtgactgaaggcagtgggacaatgaataagatg
gacttggaaaactgtcgagaggaagaacaaaagacaagaccgaagaaaccattccagggg
gataacagtggctcattgcttaagactaaggaaggtgatccactggaggaaaagggcagc
ctaactcaaggagtcttgactcattctgagaaccctgcattgaaaggaatctatcaggac
ctccagctggttacagaagctggggcctcaccctgtgggatgaacccacagctagctcag
gatccatcccggaatcagcaggtatcaaacccaccaatgcacattttagaagatgtgaag
ccaaaaaccctcccattggacaaaagcattaatcatcagattgagtctccgagtgaaagg
cggaagtctataagtggaaagaagctgtgctcttcttgtgggcttccattgggtaaagga
gctgcaatgatcatcgagaccctcaatctctattttcacatccagtgctttaggtgtgga
atttgtaaaggacagcttggagatgcagtgagtgggacggatgttaggattcgaaatggt
cttctaaactgtaatgactgctacatgcgatccagaagtgctggccaacccacaacattg
tga
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