Lipotes vexillifer (Yangtze River dolphin): 103069958
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Entry
103069958 CDS
T03090
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04140
Autophagy - animal
lve04211
Longevity regulating pathway
lve05010
Alzheimer disease
lve05014
Amyotrophic lateral sclerosis
lve05016
Huntington disease
lve05017
Spinocerebellar ataxia
lve05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103069958 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
103069958 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103069958 (RB1CC1)
05014 Amyotrophic lateral sclerosis
103069958 (RB1CC1)
05016 Huntington disease
103069958 (RB1CC1)
05017 Spinocerebellar ataxia
103069958 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
103069958 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lve01009
]
103069958 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103069958 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103069958 (RB1CC1)
Protein phosphatases and associated proteins [BR:
lve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103069958 (RB1CC1)
Membrane trafficking [BR:
lve04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103069958 (RB1CC1)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103069958 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103069958
NCBI-ProteinID:
XP_007464081
UniProt:
A0A340XRX0
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEREGSEKPDMKTSTEL
VLSPDMPATMNKPSLTSFHKSVQHVAPDTTDAESGKEMREPCPSPVQQDEAAGDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAAVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFDPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQAASSPRTESTTG
ITTTTSPRAPPPLTVQGPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTLHQASLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
AQGQEQSGHHASLGVQLEKCRVTAHDSHLSVQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
VEIRNIIEKVKCSLEITLNERHQKELQSLKSEYEGKLAALVKESEENESRITKLRGDLVR
LEEALQNKDNEFALVKHEKEAVICLQKEKEQKLLEMENVMHTQHCEIEELKQSRETVLAD
LKKLRLESDEKLQLLRAELQCLEQSHLKDLEDTLQVRHTQELKKVMTGHEVCLEKLEKEN
QQRIEQMQDSHATAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RAQQKETLKSLVEQETEHLRTEIGKLNQKIQDDNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDVLRAEVNKVTALHHQASAVEKGLKEELAELQSQLDSELSALEKQKDEKITRQ
EEEYRAVLQNLEKDKEECVMRHQQAREQLIQRLNCEKEAAVETARKEMSLEREAVEKELL
EKIKHLESQIAKSHTIESTKEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIISDLSEKLKSTMQQQERDKDLIESLSEDRARLLQE
KKRLEEEVGRLRGGGPVPFPGVAAAPELYGACAPEPPAEAPDALGEGRPDSALETSTMSV
RENVHMLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSPRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgccatccacagcaagtacaagatcgctatt
cagcaccaggtgttggtggtcaacgggggagagtgcatggctgcagaccggagagtgtgc
acctacagtgccgggacggacacaaatccaatttttctttttaacaaggaaatgatctta
tctgaacgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtcccttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
cacgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaggattgt
tcaaattcctaccaaaagctacttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaggacatcaagttaaaacttactcatttaggaactgcggtttcagtcatggct
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattccttgcctgaacgtgaaggctcagaaaagcccgatatgaaaacctccactgaactg
gtgctgtctcccgatatgcctgcaacaatgaacaaaccctccttaacctcatttcacaag
tccgtgcaacatgtagccccagacaccacagatgctgaaagtggaaaagaaatgagggaa
ccttgtccaagtcctgtccagcaggacgaagctgcaggagatgctaaagacggtgacctg
cctttttttaatgtttctttgttagactggatcaatgtgcaggataggcctaatgacgtg
gaatcgctggtcaggaagtgctttgattccatgagcaggcttgatccacggatcattcgg
ccctttatagcagaatgccgtcagactattgccaatctggataatcagaacatgaaggcc
atcaaggggctggaggaccggctgtatgccctggaccagatgatcgccagctgcggccga
ctcgtcaacgagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaagatgcatctgtgttacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgcaccactgccaaa
caagaactagcaaataaccttcatgtcagactgaagtggtgttgctttgtgatgcttcat
gctgatcaggatggagagaagttgcaggctttgctccgcctcgttatagagctcttagag
agagtcaagatcgttgaagctctgagtacagttcctcagatgtactgcttagctgctgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagacggaaagcgattatatgaggctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctgtttaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttccgaagttcagccgttcctcagggtgccctta
ctttgtgactttgaccctctacaccagcatgtacttgctctacataatttggtgaaagca
gcacaaagtttggatgaaatgtcacagaccattacagacctactgagtgaacaaaaggca
tccgcgagtcagacgtccccacaggcggcttcctcaccccggacggaaagcacgacagga
atcacaactactacctcacccagagcgccccctccactcactgtgcagggccccttgtgt
cctgcagtctgtcccttagaagaattgtctccggatagcattgatgcacatacctttgat
tttgaaactatcccccatccgaacatagaacagactcttcaccaggcttcgttagacttg
gattcattagcagaaagtcctgaatcagatttcatgtctgcagtgaacgagtttgtaata
gaggaaaacttgtcatctcccaatcctatcagtgatccacagagtccagagatgatggtg
gaatccctttactcctcagtcatcaatgccatcgacagcaggcgaatgcaggacacgagt
gcccaaggtcaggagcagtcgggccaccacgcgtctctcggcgtccagctggagaagtgc
cgtgtcactgcccacgactcgcacctcagtgtacaaaccataaaggaggacctttgccac
ttccgaacatttgtgcagaaggaacagtgtgacttctcaaattctttaaagtgtacagca
gtagaaataagaaacattattgaaaaagtaaaatgctctttggaaataacactgaatgaa
agacaccaaaaagaactacagtctttaaaaagtgaatatgagggcaaacttgctgcacta
gtaaaggagagcgaagagaatgaaagcagaatcaccaagctgaggggagacttggtgcgc
ctggaggaggccttacaaaataaagataacgaatttgctttggttaaacatgagaaggaa
gctgtcatctgcctgcagaaggaaaaggagcagaagttgttagagatggaaaatgtaatg
catacgcaacactgcgagattgaagaactgaagcagtcacgggagaccgtgctagcagac
ttaaagaagctccgcttggagagtgatgagaagctccagctgttgagggcagagctccag
tgcctggagcagagccacctgaaggacttagaggacactctgcaagtcaggcacactcag
gagctcaagaaggtcatgaccggccacgaggtctgtttggagaaattagaaaaggaaaat
caacagagaatcgagcagatgcaagattctcatgccacagccatccaggaaaaagaacag
cagctccaggaattaaaactcaaggtttctgatttgtcggacatgagatgtaagttagag
gttgaacttgccctgaaggaagcagaaacagatgaaataaaaattttgctggaagaaagc
agagcccagcagaaggagaccttaaaatctctcgtcgaacaagagacagaacatttgaga
acagagataggtaaactaaaccaaaagattcaagatgataatgaaaattatcaggtgggc
ttggccgaactaagaactttaatgacaattgaaaaagatcagtgcatctcagagctaatt
agtagacatgaagaagaatctgatgtgcttagggccgaggtgaacaaagtgacagcattg
caccaccaagcatctgcagtagagaaaggcctgaaagaagaattggctgaactgcagagt
caactggactcagagctgagtgctcttgagaaacaaaaagatgagaagatcacccggcaa
gaagaggagtacagagctgttctccagaaccttgaaaaagacaaagaggaatgtgtcatg
aggcaccaacaggcccgagaacagctgattcagaggcttaattgtgaaaaggaggcagct
gttgagactgcccgtaaagaaatgagcttggaaagggaagctgttgagaaggagttgtta
gaaaaaattaaacatcttgagagtcaaatagcaaaaagtcataccattgaatctaccaaa
gaagattcttcaagcctagtcgctgagcttcaagaaaagctccaggaagaaaaagcgaag
tttctagaacaacttgaagagcaggagaaaagaaaaaacgaagaaatgcagaatgtgcgc
acatctttgatcgctgaacaacagaccaattttaatactgttttaacaagagagaaaatg
agaaaagagaacataatcagtgatctcagtgaaaagctgaaaagcacgatgcagcagcaa
gagcgggacaaagatttgatcgagtccctgtccgaggaccgcgcgcgcttgctgcaggag
aagaagcggctggaggaggaggtcggccggctgcggggcggcggccccgtccccttcccg
ggggtggccgccgcccccgagctgtatggggcctgtgcgcccgagcccccggcggaggcc
ccggatgccctcggcgaaggcaggccggactcagcgctggagaccagcacgatgtctgtc
cgagaaaacgtccacatgctctctgaagaaaggcagaggataatgctgttggaacgaaca
ctacagttgaaagaagaagaaaacaagcggttgaatcagagactgatgtctcagagcatg
tcgtccgtatccccaaggcattcggaaaagatagctattagagattttcaggtgggagat
ctggtcctcatcatcctggacgagcgccatgacaattacgtgctcttcaccgtgagtccc
accttgtacttcctgcactcagagtcgctgcctgccctggacctcaaaccaggtgagggg
gcttcaggtgcatctcgaagaccatgggtccttggaaaagtgatggagaaggagtactgt
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
