KEGG   Lipotes vexillifer (Yangtze River dolphin): 103070161
Entry
103070161         CDS       T03090                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082  ATP-dependent chromatin remodeling
lve03083  Polycomb repressive complex
lve04110  Cell cycle
lve04213  Longevity regulating pathway - multiple species
lve04330  Notch signaling pathway
lve04350  TGF-beta signaling pathway
lve04613  Neutrophil extracellular trap formation
lve04919  Thyroid hormone signaling pathway
lve05016  Huntington disease
lve05031  Amphetamine addiction
lve05034  Alcoholism
lve05165  Human papillomavirus infection
lve05169  Epstein-Barr virus infection
lve05200  Pathways in cancer
lve05202  Transcriptional misregulation in cancer
lve05203  Viral carcinogenesis
lve05206  MicroRNAs in cancer
lve05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103070161 (HDAC1)
   03083 Polycomb repressive complex
    103070161 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    103070161 (HDAC1)
   04350 TGF-beta signaling pathway
    103070161 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    103070161 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    103070161 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    103070161 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    103070161 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103070161 (HDAC1)
   05202 Transcriptional misregulation in cancer
    103070161 (HDAC1)
   05206 MicroRNAs in cancer
    103070161 (HDAC1)
   05203 Viral carcinogenesis
    103070161 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    103070161 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103070161 (HDAC1)
   05165 Human papillomavirus infection
    103070161 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    103070161 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    103070161 (HDAC1)
   05034 Alcoholism
    103070161 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103070161 (HDAC1)
Enzymes [BR:lve01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103070161 (HDAC1)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103070161 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     103070161 (HDAC1)
    BRAF-HDAC complex
     103070161 (HDAC1)
    REST complex
     103070161 (HDAC1)
    SHIP complex
     103070161 (HDAC1)
    MiDAC complex
     103070161 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103070161 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103070161 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    103070161 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103070161
NCBI-ProteinID: XP_007468738
UniProt: A0A340Y681
LinkDB
Position
Unknown
AA seq 538 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQSIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEGLPLAIPALLCSRSHRRGENQG
GEARSQRVRKEPSIISLALEHQPLCPTTLRGKAQGQLVQLTKASFRDQSVCLCSSRQS
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctccttaactatggtctctaccgaaagatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacattaaattcttgcgctccatccgc
ccagataacatgtctgagtacagcaagcagatgcagagatttaacgttggtgaggactgt
ccggtatttgatggcctctttgagttctgtcagctatctactggtggctctgtggcaagt
gccgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctacac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgagtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tattatgctgttaactacccgctccgagatgggattgatgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcccagtgcagtcgtcttacag
tgtggctctgactccttgtctggtgatcggttaggttgcttcaatttgaccatcaaagga
cacgccaagtgtgtggaatttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggtggctacaccattcgtaatgttgcccggtgctggacatacgaaacagctgtggccctg
gacacggagatccctaatgagcttccatacaacgactacttcgaatactttggaccagat
ttcaaacttcacatcagtccttccaatatgactaaccagaacactaatgagtacctggaa
aagatcaagcagcgactgtttgagaacctgagaatgctgccccatgcgcctggggtccaa
atgcagtccattcctgaggatgccattccagaggagagtggcgatgaggatgaagaagac
cctgacaagcgcatttcaatctgttcctcggacaaacgaattgcctgtgaggaagagttc
tctgactctgacgaggagggagaaggcggtcgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaacagaagatgagaaagagaaggacccagaagagaagaaagaggggctg
cccttggccatccctgcactcttatgttctagaagtcacagaagaggagaaaaccaagga
ggagaagcaagaagccaaagggtgaggaaggagccgtctatcatctccctggcattggag
caccagcccctttgtcccaccacgctgagagggaaggcgcagggacagctggtccagctt
acaaaggcctctttcagggaccagtctgtctgtctctgcagttctaggcagagctag

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