Lipotes vexillifer (Yangtze River dolphin): 103070317
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Entry
103070317 CDS
T03090
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lve03037
]
103070317 (IFT88)
Cilium and associated proteins [BR:
lve03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103070317 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_19
TPR_14
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_10
ARM_TT21_4th
TPR_CcmH_CycH
TPR_17
ARM_TT21_5th
TPR_21
RPN7
ARM_TT21_N
TPR-S
ARM_TT21_C
HEAT_Nup120
TPR_15
HAT_PRP39_C
Coatomer_E
ARM_TT21_2nd
DUF6584
Motif
Other DBs
NCBI-GeneID:
103070317
NCBI-ProteinID:
XP_007464571
UniProt:
A0A340XT91
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMENVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVKTSHSRRPPVTAKIPSTA
VARPVATGCGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEARNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTSPENINLDLTYSVLFNLASQYSANEMYPEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
VAANLKAGFNLILSCFAVGDREKMKKAFQQLVAVPSEADEGGRYTSPNDDPHTNLVIEAI
KNDYLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAVMYLRQKDFNQAVETLKMFEKKDSSVKSAAATNLSFLYYLENEFSQASSYADLAVNS
DRYNPSALTNKGNTVFASGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANIYELMEDPNQAMEWLMQLISVVPTDSRALSKLGGLYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRTKSGRDGSGGPRGRRDGSAGSDSGQNCGAGSRGERLSAQLRALPRTEEPYDSS
SNKELDASYVDPLGPQIERPRTAAKKRVDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctatgataccgaggaattggagaatgacacagcttttcagcaa
gctgtgaaaactagtcacagcagaagacctccagtaactgctaaaataccaagcactgca
gttgctagacctgtagctactggatgtgggtccaagacatccctggcatcgtcaatggga
agaccaatgacaggggctattcaggatggagttactagacccatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcattcgaccccctcggtcagtcgcgg
ggccctgcaccgcccctggaggccaggaacgaagacagtccagaagagaagataagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgctaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagttctggtgaga
caacgagaacaagttacaagtccagaaaacatcaatttggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgaaatgtatcctgaagcactaaacacctat
caagttatagtgaaaaataagatgtttagcaatgcaggacggttgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcctta
gatcaaattccaagtgtccataaagaaatgaggattaagattatgcagaacattggtgtt
acatttattaaaactgggcagtattcagatgccattaattcatttgagcacataatgagt
gtggcagcaaacctgaaggcaggcttcaacctcattctcagttgctttgctgttggagat
cgagagaaaatgaagaaggccttccagcaactggttgctgttccgtcagaggctgatgag
ggtgggagatacacgtcaccaaacgatgacccacatactaatttagtgattgaagctata
aaaaatgattatctaaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctggcaaatgatctggaaata
aacaaagcagttatgtacctgagacaaaaggactttaaccaagctgtagagaccttaaaa
atgtttgaaaaaaaggacagtagtgtgaagagtgcagctgcaactaacctctcattcctg
tattatttggagaatgaattctcacaagccagtagctatgcagatttagctgtgaactct
gacagatataacccgtcagctcttactaataaagggaatacagtttttgcaagtggtgac
tatgagaaggcagctgaattctataaagaggctctaagaaatgattcttcttgtactgaa
gcactttataatattggccttacctataagaagctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcacgcaatcctaagaaacagcgcccaagtcctttaccagatagca
aatatatacgagttaatggaagatcccaatcaagctatggaatggttaatgcagctgatc
agtgttgttccaactgactccagagctttgtctaaactgggaggattatatgacagtgag
ggggataaatcccaagcattccaatattactatgagtcgtataggtatttcccgtccaat
attgaagtcatcgagtggctcggggcctattacatcgacacccagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtagctagttgttttagaagaagtggtaactaccaaaaagcattagatacttacaaagat
attcacagaaaatttccagaaaatgttgaatgtctacgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgcaacaaaactcaagagattggaaaaaatg
aaagaaatcagggaacagcgcaccaagtccggcagggacggcagcgggggtccccgcggc
aggagagacgggagcgctggcagtgacagtggccagaactgtggtgctggtagcagaggc
gagcggctcagcgcccagctgcgagccctgcccaggacagaggagccttacgacagcagc
agtaacaaggagctagacgcctcctatgtggatccgcttggcccgcaaatagaaagaccc
agaactgcagccaaaaagagagtcgacgaggatgattttgctgatgaagagttaggagat
gatttgcttccagaataa
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