Lipotes vexillifer (Yangtze River dolphin): 103070548
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Entry
103070548 CDS
T03090
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103070548 (FOCAD)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103070548 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
103070548
NCBI-ProteinID:
XP_007455014
UniProt:
A0A340X6T9
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MSDYIRKRFEFPNSLIQSQAAGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDLAEFSYVLNGILNLIPSTRDTHGLIKAIMKLLQMQALKEGHGG
EKNIQDIYNIRNHPQPLITVLEHRPDCWPVLLQQLTTFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLALLKVLLHPRVLCDKEQPSILEQQMLQLCCDMVPCLQMRDLIQT
TEVMLFIEEVYLSLLRHPVFWKIQLIQMTLQLLCVCEVSLNITGECSSLIHLLEHSVELL
KEDFPVEPVIIGIALLLLQTPASQQKPILSLALKLLSSAEGQKIPKSSLLLVMPVLQILS
STALKDCISPDEQGPSRQQLALNLLEMVQQECYRDDHQKLSCKLVFPITSMYGSVFTAWR
ILEVMREESAISDWLASVESLLPITTAIPAHVFLLLAYLLVEDKGRNLRQILKVTTEFAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPALGVHKVCIGQILRVIQLLGTTPQLK
AVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAISQMLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDMR
PLILKTLSELFSLVPSLTVNTADYENFKVQVLSFLWNHTQNKDPVVANAAYKSLSHFGAR
EHTILHLPEKVRPEIQIPDDLDEDEEGDEKDVDLSIPGSCYLKLLSLTAPSVLPALEEFF
TSLVKQEMMNMPRGVYHSALKGGARLDQGKTVAGIPNFMLKMYEANKQPGLKPGLAGGML
FCYDISMYQSKDGKPLNRLMANRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMT
RAYHAILQGRIGELELQLKHGKEGPEEVQYKKSTAWLWVRDMLTDEVTKAAAKDSPVVKG
NALLALSSLAVVVSKHEASLSSDSEGDLEVQPNFLSMKVWVSMVFDTLLVIVDSHYQPRG
QLFSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPS
ADESQAVQIHMGLALGMFLSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDTSLEYNTG
CILGVGLVLSLMSHSSRTESRVHVAASLRKLSVYLDDSGGQSRTFQEVLAYTLSCVCTSA
FSAGIVEAVEAEDIMNKLRLLVENNQQTSGFALALGNIVHGLSVCGHGKAEDLGNKLLPA
WIRIVLTEGTSTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSHFQGRLNEVIRTLTQVI
SVSGVIGLQSNAIWLLGHLHLSTLSSNQSRTSVPTDYSYLPESSFIRAAIGFFITGGKKG
PESVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQS
SQNVAALLGIWVMPPLIHGLSLNIKKYLLLSVPSWIKHVSDEQIVGFVESLMVTVFKAAS
PLSKPELCLSALQGLSQAMKQRSPAYHLWSLLSKATGKIFDLLPNKIRRNDLELYISVAK
CLSEMTDDEANRVAQITENSLEKAAFVRLYLVSQGRFPLMGLTDVLSVAIRHHEKDTLAW
MILHSLYQARIVSHANTGLLKRMEWLLELMGYIRNVAYQSASVQNVALNEALDFLLLIFA
AAVVAWADHAAPLLLGLSASWLPWHQENGPAGPASRFLGRSPLHRVTVQEAVTLLPSSMP
LLLQKEPWKEQTQKFIDWLFSIMESPKEGLSAKSRNLLKATLLSLRVLPEFTKKAVWTRA
YGW
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gcaggtcatcttattgctgcagttctaaaggagaatggtttttcagaaaagatccaccag
tccacaaaccagactcctgctttgaacttgctgtgggagaagtgttgcagtgataatgtc
gtggttcgaacagcctgctgtgagggtctggtagcccttgtcgctcaggatcttgcggag
ttcagctatgttctcaatgggattctcaacctgattccatcgaccagggatacacacggc
ttgataaaagccattatgaaattattacaaatgcaagctcttaaggaaggacatggtgga
gagaagaatattcaggatatatataatattagaaaccatcctcagcctttgatcactgtg
cttgaacacagacctgattgctggccagtacttttgcaacagctgacaacttttttccag
caatgccctgaaaggtcagaagtttcatgtatccaaataatggcaccgtttctatggtat
ctgtattgtgaaccatcccagttacaagaatatgctaaactccgactagctctgctcaaa
gtcttacttcacccccgggttctttgtgacaaagaacagccatcaatattggaacaacag
atgctacaactgtgttgcgacatggttccatgtttgcagatgagagatttgatacagaca
acagaagtgatgctgtttatcgaagaagtatatttaagccttctgcgtcatcctgttttc
tggaaaattcagcttatccagatgacccttcagctgctgtgtgtctgtgaagtcagctta
aacataactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaacccgtcataattggaatagctttactactactacagact
ccggcaagtcagcagaagccaatcctaagtctagctctgaagcttctctcttctgctgag
ggtcagaaaatcccaaagtcctccttgctgctagtgatgccagttctgcagatattatct
tctactgccttgaaagactgtatatccccagacgaacaaggaccctctaggcagcagttg
gctctaaaccttttagaaatggtacagcaggagtgctacagagacgaccaccaaaagctc
tcctgcaagcttgtgttccccataaccagcatgtatgggtcagtatttacagcctggagg
atccttgaagtaatgagagaagagtctgcgataagtgactggttagcttccgtagagtca
ttgctccctattaccacagcgatccctgcacatgtttttcttctgctggcttacctcctt
gttgaagataaaggacgaaatcttcgtcagatactgaaggtcactacagaatttgcccaa
gctgattcctctcaggtaccaaatctgattccagttttgatgttcaaattaggaagacca
ctggaacctgtgttatacaatgatatcttgtatactttgcctgcacttggtgttcacaag
gtgtgcataggacaaattctacgagtaattcaacttcttggaaccactccgcaactgaaa
gctgtcactttgcgcttgttgacttctttgtgggaaaaacaggatcgtgtctatcctgaa
ctgcagcgtttcatggccatgtccgatgtgccttctctgtctgtgggcaaggaggtccaa
tgggagaaactgatagctaaagcagcatcgatcagagatatatgtaagcaaaggccatat
cagcatggtgcagatatgttggcagctatttcccagatgttgaatgaatgcaccaagcct
gaccaggctactccagcagccttggtgttacaaggtcttcatgcactctgccaggctgag
gtggtttgtattcgctccacttggaatgctctctccccaaagctgagttgtgacatgaga
cctctcattttgaagaccctcagtgaactgttttctctggttccttccttaacagtcaat
acagctgactatgagaattttaaagttcaagtcctcagcttcctctggaaccacactcaa
aacaaggacccagttgtagcaaatgctgcatataaatctctgtcacacttcggtgccagg
gagcacaccattcttcatctgcctgaaaaggtaagaccagaaatccaaatccctgatgac
ctagatgaagatgaggagggtgatgaaaaggacgtggatctttccattcctggttcttgc
tatctcaaactgttgtcactcactgctccttccgttttaccagctttggaggaatttttc
acatcacttgtgaagcaagaaatgatgaatatgccccgtggggtgtatcactctgcatta
aaaggaggtgcccgcttagatcaaggaaagactgtagcaggaatccccaattttatgttg
aaaatgtatgaagcaaacaagcaaccaggtttgaaacctggccttgcgggtggtatgcta
ttttgttatgatatttcaatgtatcagagtaaagatggcaaaccattgaatagactgatg
gccaatagagggcgaagtttcaagcagacttcactcgctctagtgcatgaggttcacatc
caactttccgagtggcaccgtgcaatttttctcccacaggcctggctcgcatatatgact
cgtgcttatcatgccattttacaggggaggataggagagctggagttgcagttaaaacat
ggaaaagaaggacctgaggaggtgcaatacaaaaaaagcacagcctggctctgggttcgg
gacatgttgactgatgaggtcaccaaagcagctgcaaaagacagcccagtggtcaaaggc
aacgcgctgttagccttaagcagccttgctgtcgtcgtttccaaacatgaagccagcctc
tcctcagactctgagggtgacctggaggttcaacctaatttcctctcaatgaaagtgtgg
gtttccatggtgtttgatactcttctggtcattgtcgatagccattaccaacccagagga
caacttttctcctggttttattataaatcctattctggtgaaaacacagctagtgccatt
gcacgttctgcggccgccacggctttgtctctccttgtgccagttttcattatctcttgc
aaagagaaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagt
gctgatgagtctcaagccgtgcaaatccacatgggccttgctttggggatgtttctctct
cgcttgtgtgaggagaaactcagtgatatatctggccaacagatgaaccttcttctgatg
aagtctttggatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggc
tgtatactgggagttggacttgtcctgtccctcatgagccacagcagccgaacagagtcg
cgagttcacgtggcagcctcgcttcggaagctctccgtgtacctagatgacagcgggggc
cagagcagaacctttcaggaggtccttgcctataccctcagctgtgtatgtacatccgca
ttcagtgccggaattgttgaggctgtggaggctgaagatattatgaataagcttcgactg
ttagtggagaacaaccagcagacttcaggttttgccctggcgttaggaaacatagttcat
ggtttgtctgtgtgtggacatggaaaagctgaagacttgggcaacaaactgctccctgcc
tggatcagaattgttctaacagagggcacctccacaatgctttgtttggcagctcttcat
ggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcggaagccatc
cagtcctctcattttcaaggcagacttaatgaagtcattagaactttaactcaggtcatc
agtgtgtctggggtgattggtcttcagtcaaatgcaatctggcttctaggacatcttcat
ctgtctactctgtcctcaaatcaaagtagaacctcggttcctactgactatagctatttg
cctgaaagcagttttattagagcagccattggcttcttcattacaggaggaaaaaaaggt
cctgaatctgtgcctccttcccttctcaaagttgtgatgaaacccatagcaactgttgga
gaaagctaccagtatcctcctgtgaactgggctgcactcctctctccacttatgaggcta
aactttggtgaagagattcagcaactgtgtcttgaaattatggtgacccaggctcagtca
tcccagaatgtagctgcactgttgggaatatgggtgatgccaccactgatccatggtctg
agtctgaatatcaagaaatacctcctgctatctgtgccttcgtggataaaacatgtctct
gatgaacagatcgtgggttttgttgaaagcttaatggtgacagtttttaaagcagcttcc
ccactctccaaacctgagttatgcctgagtgccttacagggtctgagccaggccatgaaa
cagcgcagccctgcctaccacctctggagtctgctcagcaaagctactgggaaaattttt
gaccttctgccaaataagattcggagaaatgatctagagctgtatatcagtgtagcaaaa
tgcctctcggaaatgacagacgatgaagccaatcgggttgcccagattactgagaacagc
ctagaaaaggctgcctttgtcagactatacttggtctctcaaggacgattccccttgatg
ggcttgactgatgtgctcagtgttgctattcggcaccatgaaaaagacacactggcctgg
atgatactgcacagcttataccaggcacggattgtgagccacgccaacaccggcttgttg
aagagaatggagtggctcttggaactgatgggttatatcagaaatgttgcttaccagtca
gcgtctgttcagaatgtggctcttaacgaggctttggatttcttgttgctgatatttgca
gcagcagtggttgcatgggcagaccatgctgcccctctgctccttggcctcagtgccagt
tggttgccatggcatcaggaaaatggtccagctgggccagcatcaaggttccttggcaga
agtcccttgcacagggtcactgtgcaggaggctgtcactctccttcccagtagcatgcct
cttctgctgcagaaagagccatggaaggaacagacccagaagttcattgactggctattc
agcatcatggaaagccctaaagaaggcctctcagcaaagtccaggaatcttttaaaagcc
accctgctgtccttgagagttctcccagagtttacgaagaaagctgtatggaccagagcg
tatggttggtaa
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integrated database retrieval system
