Lipotes vexillifer (Yangtze River dolphin): 103070575
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Entry
103070575 CDS
T03090
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04382
Cornified envelope formation
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04518
Integrin signaling
lve04820
Cytoskeleton in muscle cells
lve04926
Relaxin signaling pathway
lve04933
AGE-RAGE signaling pathway in diabetic complications
lve04974
Protein digestion and absorption
lve05146
Amoebiasis
lve05165
Human papillomavirus infection
lve05200
Pathways in cancer
lve05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103070575 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103070575 (COL4A6)
04518 Integrin signaling
103070575 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103070575 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103070575 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103070575 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
103070575 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
103070575 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103070575 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
103070575 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103070575 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
103070575 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103070575 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103070575 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103070575 (COL4A6)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103070575 (COL4A6)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103070575 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103070575
NCBI-ProteinID:
XP_007463737
UniProt:
A0A340XUA7
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MAGEKKPYGKPCGGQDCIGGCKCSPEKGARGRPGPIGIQGPVGPQGFPGPSGLSGLKGER
GSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHSGQPGPRGPPGLDGCNGTQGAVGFPGPD
GYPGLRGPPGLPGQKGSKGEPILAQGSFKGMKGEPGLPGLHGITGPQGAPGSPGAVGPIG
PPGLQGPPGPPGSPGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKG
SKGEPGLQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRGPTGLEGVQGPPGSQGKKGS
SGFPGLNGFPGIKGEKGDIGLPGPDVFIDTDGAVISGYPGDPGMPGLPGLKGDEGIQGLP
GPPGAPGLPALPGGPGTLGLQGVPGLKGDQGNPGHTTIGAAGLPGRDGLPGLPGLPGPPG
PAFERGTLQSTEPGLPGLRGERGPKGNPGLKGIKGDSGFCACDGGVPNIGPPGEPGLPGP
PGLLGLPGLKGTRGDPGFGGAQGPSGDPGVFGPRGLEGPKGKKGEATVSTGSGMPGDQGD
PGLQGLPGETGAPGKDGVPGLPGLPGFQGDGGQGFPGEKGLPGLPGEKGRTGPIGPPGIG
LPGSSGPRGLPGDKGVDGFPGQPGPPGIPGDCCCREKVGQGDLDTEGGITLPCIIPGPYG
PSGFPGAPGFPGPNGARGLPGTPGQPGLHGNKGEPGSPGLVHLPEMPGFPGPRGEKGLPG
FPGLPGKDGLPGKVGSPGLPGPKGAPGDIIGAENGAPGKQGLQGLPGDRGFPGDSGLTGP
KGLLGKSGLLGPKGDRGSPGIPGRAGQPGPRGSDGLFGIKGKPGLPGAPGFPGTSGHPGK
KGPRGDIGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGATGLPGLPGPKGEKGSVGL
IGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGQAGSPGEKGDRGDPGPVGVPSPRLPVLN
LHFTGDKGSQGSAGSIGFPGPRGDKGEAGSPGPPGLPGAPGFPSLIKGLSGRPGSPGSTG
LRGLPGLKGSPGITGFPGIPGESGSQGLSGAPGLPGASGLPGLKGDRGRTLGISGSPGPK
GQPGEPGFKGVKGKDGPVGDVGFPGNKGGDGKVGISGDVGLPASPGLPGVAGMRGNPGLP
GSSGHPGAAGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGERGSPGIGIGAPGKPGVRGPKGSRGFPGLQGPAGLPGAPGLSLPSVIAGQPGDPGRP
GLDGEQGRPGPPGPPGPPGPSSDQGDPGGPGFPGIPGPQGPKGDQGTPGFSGLPGELGLK
GMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGAPGQTPIAEAIQAPPGPMGL
TGIDGIPGLMGDPGVQGPGGLQGFKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGF
EGAPGKPGPFGRAGMPGQSVRVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPPY
ISRCSVCEAPSQAIAVHSQDITIPQCPTGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEEEREQFGEEPVSETLKAGQLHTRVSR
CQVCMKSV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagagaagaagccctatggaaagccatgtggaggccaagactgcattgggggc
tgtaaatgctctcctgagaaaggagcgcgagggcgaccaggaccaatcggaattcaaggt
ccagtgggtcctcaaggatttcctggccctagtggtttatcagggttgaaaggagaaagg
ggctccccaggacctctgggaccgtatggaccaaaaggagataagggtcccatgggagtt
cctggctttcttggcatcaatgggattccgggccactccggacagccaggacccagaggc
ccacctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgat
ggctatcccgggcttcgcggaccacccgggcttcctggtcagaaaggctctaaaggtgaa
cctatccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactg
catggaatcactggcccacaaggagcacccggatctccaggagctgtgggacccatagga
ccaccaggtttgcaaggtcctccagggccccctggttcccctggtcccgatgggaatatg
gggttaggtttccaaggagagaaaggagtcaagggggatgttggcctgcctggccctgca
ggacccccaccatctactggggaactggaattcatgggatttcccaaagggaagaaagga
tccaagggtgagccagggcttcagggcttcccaggaataagtggtcctccaggtctcccg
ggttttggaattgctggagaaaaaggagaaaagggaatccctggtttgccgggacctagg
ggtcccacgggtttagaaggagtccaaggccctccagggagtcagggcaagaaggggtca
tcaggcttccccgggcttaatggattcccaggaattaagggtgaaaagggtgacattggc
ctgccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctgga
gaccccggtatgccaggcctcccaggccttaaaggagatgaaggcatccagggcctgcct
ggccctcctggtgcccctggattaccagctttaccaggtggccccggtactctagggctc
cagggagttccaggcctgaagggggaccaaggaaaccccggccacaccacaattggggca
gctggcctccctggcagagatggtttgccaggcctaccaggcctaccaggcccacccggt
ccagcatttgagaggggaactctacagagcacagagccagggttgcctggtctccgagga
gaacgaggtccgaaaggaaacccaggcctcaaaggaatcaaaggggactcaggtttttgt
gcttgtgatggtggtgtcccaaacattggaccacctggggagccaggcctgcctgggcca
ccaggtctcctgggccttccgggcctgaaaggaacgagaggagatccaggctttgggggt
gcacagggcccatcaggggatccaggtgtatttgggcctcgaggtctggaaggccccaaa
ggaaagaaaggggaagcgactgtcagtacaggatcagggatgccgggagatcagggtgat
cctggtctccaggggctccctggtgagacaggagccccaggcaaggacggagtaccaggt
ttaccaggcctgccaggctttcagggtgatggtggacagggcttcccaggtgaaaagggg
ttaccagggcttcctggtgaaaaaggccgcactggtccaattggccccccaggaattggg
ctaccaggatcttctggacctcgtgggcttcccggagataaaggagtagatggattccca
gggcaaccaggcccccctgggattccaggtgactgctgctgcagggagaaggttgggcaa
ggagacttagacacagagggaggtatcaccttgccttgtattattcctgggccatacggt
ccatcaggattcccaggagctcccggattcccaggccctaacggggcccgtggcctccct
gggactccaggccagcctggattgcatggaaataaaggggagcccggaagtccaggattg
gttcacctccctgaaatgccaggatttcctggacctcgtggagagaagggcttgcctggg
tttcctgggctccctggaaaagatggcttgcctgggaaagttggcagtcccggcttacca
ggtcccaagggagcccctggtgacatcattggtgctgaaaatggtgctcctgggaagcaa
ggcctacagggactgccaggagacagaggatttcctggagactctggccttacaggaccc
aagggtttgcttgggaagtcgggcttgctgggccccaaaggtgatcggggcagccctgga
ataccaggccgcgcaggacagccaggcccccggggatctgatggtctattcggcatcaag
ggcaaacccgggctcccaggagcaccaggctttccaggcacttcaggacatcctggaaag
aaaggcccaagaggcgatataggtccccctgcatcagctggaaagagaggcctgcctggg
ctgaaaggccttccgggatctccagggctaattggcttcctggggaactccggcttgcca
ggggccactggactgccaggcctgccaggtccgaagggtgagaaggggtctgttggactg
ataggttttccagggattccaggtctccctggtattcctggtgcaagtggattaaaggga
attcctgggtcgacgggaagagttggaccatctggacaggctggtagccctggtgaaaaa
ggagacagaggcgacccggggccagtcggagtacccagccccagacttccagtgctgaac
ctgcacttcacaggagacaaaggctctcagggctcagctggatccatcggatttcctggg
cccagaggtgacaaaggagaggctggcagccccgggccaccaggcttgcctggagctcct
ggcttccccagcctcatcaagggacttagcgggagaccaggctcccctggctccacagga
ctacggggcttacccggcctgaaggggtcccctggaatcacaggtttcccaggaatacca
ggagaaagtggttcacagggtctcagtggagctcctgggctcccaggagcatctggtctc
ccaggtttaaaaggagatcgaggccggacacttggaatttctggtagcccaggacccaag
ggacaacctggggagcctggtttcaaaggcgtgaaaggaaaagatggaccagtcggtgat
gtgggtttcccaggaaacaaaggtggagatgggaaagttggtatttctggagatgttggc
cttcctgcctccccaggactccccggggttgcaggcatgagaggaaatccagggcttcca
ggttcttcaggccacccaggggcagctgggcccctgggaccccctggcctaataggaacc
aaaggtttccctggacttcctggcttacatggactgaatgggctgccaggaaccaaggga
acccatggaactccaggacctagtataaccggtgtgcctgggccagctggcctgcctggt
cccaaaggagaaagaggttctccaggaattggcatcggagccccaggaaagccaggcgtg
agaggaccaaaaggtagcagaggtttcccaggtctccagggccccgccggtctccctggt
gccccaggcctctccttgccctcagtcatagcaggacaacctggcgaccccgggcgacca
ggcctagatggagagcaaggccgcccaggccccccggggcccccaggaccccctgggcca
tcctcggatcaaggcgacccgggaggccctggcttccctggaattcctggccctcaaggg
cccaagggagaccaagggactccaggtttctctggcctccctggagagctaggactgaaa
ggcatgagaggtgagcctggcttcatggggactccaggcaaagttgggccacctggagac
ccaggacttccggggatgaaggggaaggcagggccaagaggcttatccggcccccgaggc
gctcctggacaaacaccaattgcagaagccatccaggctcctcctggacccatgggtcta
acaggcatcgatggcatccctggcctcatgggggaccctggggtccaaggccctggaggc
ctacaaggcttcaaaggtttacctggtatccccggcaaagacggccccagtggactccct
ggcccacctggggctcttggtgatcctggtctccctggactgcaaggccctccaggattt
gaaggagctccagggaagccggggcccttcgggagggctggaatgcctgggcagagcgtg
agagtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccgtt
ggaatgagccagctgtgggtgggttatagcctgctgttcgtggaggggcaggagaaagcc
cacaaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaagtgtgccactatgcccgacgcaacgataaatcctactgg
ctctccaccaccgcgcccatccccatgatgcccgtcggccagacacagattcccccgtac
atcagccgctgctctgtgtgtgaggcgccctcacaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccacgggctggcgcagcctctggattgggtactccttcctc
atgcacacggccgccggcgctgagggcgggggccagtccctggtctcccctggctcctgc
ctagaggatttccgagccactcctttcatcgagtgcagtggtgcccggggcacctgccac
tactttgccaacaagtacagtttctggctgacgacggtggaagaggagagggagcagttc
ggggaggagcctgtatctgagacgctgaaagccgggcagctccacacccgggtcagccgc
tgccaggtgtgtatgaaaagcgtgtag
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integrated database retrieval system
