Lipotes vexillifer (Yangtze River dolphin): 103070921
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Entry
103070921 CDS
T03090
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03015
mRNA surveillance pathway
lve04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103070921 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103070921 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103070921 (SYMPK)
03019 Messenger RNA biogenesis [BR:
lve03019
]
103070921 (SYMPK)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103070921 (SYMPK)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103070921 (SYMPK)
U7-dependent histone pre-mRNA processing factors
103070921 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
103070921
NCBI-ProteinID:
XP_007458569
UniProt:
A0A340XH21
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSATSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNTYLAAGAAGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSSSSARPGPPQPEEAIDFREEGPECE
TPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLISKEERKRSPQTLTPAGEDTVKT
PSPTAEEAGEPETKGNS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggacagcgtcactcgccggagtgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggcatgaccacatcagagagagtggtggatctcctc
aaccaggcagcactgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caagcagacaagtccattgaagtgcgcaagtttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcgaatctcaacatgctcttgagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagcgagctccaggaagcctgctgggatatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcgccccgcatggccgac
tcggaggtgcctcgacgccaagagcacgacatcagcctggaccgcatccctcgtgaccat
ccctatatccagtacaatgtgctgtgggaagaaggcaaggcagccttagagcagttgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gccaatattgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggctcag
atcaccaccctgctggtagacctgggcacacctcaggctgagatcgcccgcaacatgccc
agcggcaaggatgcccgcaagcggccccgagacgactcagattccacgctcaagaagatg
aagcttgagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gcgacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag
ttcctacagcctctgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgca
ggactggggccaggtgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagtgtcctgatcaagcggcgcctgtcagctcagggtcaggccatc
tcagtagtgggctccctgagctccatgtccactctggaggaggaagcgccccaggccaag
aggaggccagagcccatcatccctgtcacgcagccccggctggcaggtgccggcgggcgc
aagaaaatcttccgtctgagtgatgtgctgaagcccctgaccgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggccgtggcctgcagcggt
gcagcccaggtgcgcataaagatcctggccagcctggtgactcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaagacgtgcgggcccgcctggacctggccttt
gcctggctctaccaggagtacaacacctacctagcagctggtgccgcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggccttcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactggaggcgccgctgatcactgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccatgagaaggacaaggtgcgttcccaggccttgctattcatcaagcgcatgtac
gagaaggaacagctacgagagtatgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaacccgccatctgtgctctttggagccgacaaggacacagaggtggcagcg
ccctggactgaggagacagtaaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccacgagctggcagccgtgtatactgaggccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgcctgag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgttgtctg
cacagcctcacggacaaagtcccaccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgactgcccgacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaggaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaggag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg
aaccctggagagcttctcatcgcattgcacaacatcgactcctcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccaatccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccggagctccgggagcccctgctggcccacgtccgt
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaagagccagagactaaggaagcacctgccgggcccctggaagaggatgac
ttagagcccctggccctggcaccgcccccggccccccgcccccctcaagacctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctgggggagtgggagccccctcctcgtcctcctcgtcgttgtcctcttcctcggcccgg
ccaggccctccccagccggaggaagccattgatttccgggaggagggtcctgagtgtgag
accccggccatcttcatcagcatggatgatgactcggggctgactgaagctgcactgctg
gactctagtcttgagggacccctacctaaggaagctgcagcgggcggattgatttcaaag
gaagagaggaagcggagcccccagaccctcacccctgccggagaagacaccgtgaagact
cccagccccactgctgaggaagccggggaacccgagaccaaggggaacagctga
DBGET
integrated database retrieval system
